The entropy and efficiency of a molecular motor model

DOI10.1088/1751-8113/42/44/445003MaRDI QIDQ3645348zbMATH OpenOpenAlexFDO

Authors Eliran Boksenbojm, Bram Wynants

Publication date 18 November 2009

Published in Journal of Physics A: Mathematical and Theoretical (Search for Journal in Brave)

Full work available at URL https://arxiv.org/abs/0906.4222

Mathematics Subject Classification ID

Applications of Brownian motions and diffusion theory (population genetics, absorption problems, etc.) (60J70) Biophysics (92C05) Thermodynamics and heat transfer (80A99)

Abstract: In this paper we investigate the use of path-integral formalism and the concepts of entropy and traffic in the context of molecular motors. We show that together with time-reversal symmetry breaking arguments one can find bounds on efficiencies of such motors. To clarify this techinque we use it on one specific model to find both the thermodynamic and the Stokes efficiencies, although the arguments themselves are more general and can be used on a wide class of models. We also show that by considering the molecular motor as a ratchet, one can find additional bounds on the thermodynamic efficiency.

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(7)

• Stokes efficiency of molecular motors with inertia
• Efficiency bounds of molecular motors under a trade-off figure of merit
• THE MEAN VELOCITY OF TWO-STATE MODELS OF MOLECULAR MOTOR
• The efficiency of molecular motors
• Relative entropy and efficiency measure for diffusion-mediated transport processes
• Stokes efficiency of molecular motor-cargo systems
• A free energy based mathematical study for molecular motors

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