From Genotypes to Genes: Doubling the Sample Size

DOI10.2307/2533494zbMATH Open0931.62099OpenAlexW2086286256WikidataQ28258448 ScholiaQ28258448MaRDI QIDQ4381017FDOQ4381017

Authors: Peter D. Sasieni 

Publication date: 21 February 2000

Published in: Biometrics (Search for Journal in Brave)

Full work available at URL: https://semanticscholar.org/paper/75da52608fc3945e64b2555e30914c5f50ed743d

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zbMATH Keywords

score testcase-controlHardy-Weinberg equilibriumchi-squared statisticsHLA typing

Mathematics Subject Classification ID

Applications of statistics to biology and medical sciences; meta analysis (62P10) Genetics and epigenetics (92D10)

Cited In (50)

• Robust suptest for the genetic association study under genetic model uncertainty
• Assessment of Population Structure and Its Effects on Genome-Wide Association Studies
• Unifying genetic association tests via regression: Prospective and retrospective, parametric and nonparametric, and genotype‐ and allele‐based tests
• Some statistical properties of efficiency robust tests with applications to genetic association studies
• Asymptotic powers for matched trend tests and robust matched trend tests in case-control genetic association studies
• Bayes factors in the presence of population stratification
• A generalized robust allele‐based genetic association test
• Improving power for testing genetic association in case-control studies by reducing the alternative space
• A robust test for two-stage design in genome-wide association studies
• Flexible Designs for Genomewide Association Studies
• FRACTAL CHARACTERIZATIONS OF MAX STATISTICAL DISTRIBUTION IN GENETIC ASSOCIATION STUDIES
• Excess false positive rate caused by population stratification and disease rate heterogeneity in case-control association studies
• Genomic Control for Association Studies
• An exact test for the association between the disease and alleles at highly polymorphic loci with particular interest in the haplotype analysis
• Trend tests for genetic association using population-based cross-sectional complex survey data
• Effective sample size: quick estimation of the effect of related samples in genetic case-control association analyses
• Optimal screening for promising genes in 2-stage designs
• Leveraging Hardy-Weinberg disequilibrium for association testing in case-control studies
• A novel powerful joint analysis with data fusion in two-stage case-control genome-wide association studies
• Exploring case-control genetic association tests using phase diagrams
• Impact of population substructure on trend tests for genetic case-control association studies
• Using Duplicate Genotyped Data in Genetic Analyses: Testing Association and Estimating Error Rates
• Genetic risks and genetic model specification
• SNP selection in genome-wide association studies via penalized support vector machine with MAX test
• Robust tests in genome-wide scans under incomplete linkage disequilibrium
• Increasing Power for Tests of Genetic Association in the Presence of Phenotype and/or Genotype Error by Use of Double-Sampling
• Two-Stage Designs for Gene-Disease Association Studies with Sample Size Constraints
• Analysis of genetic association studies incorporating prior information of genetic models
• Exact tests based on the Baumgartner-Weiß-Schindler statistic -- a survey
• Testing for association on the X chromosome
• An investigation on the allelic chi-square test used in genetic association studies
• Robust tests for gene-environment interaction in case-control and case-only designs
• Robust methods to detect disease-genotype association in genetic association studies: calculate \(p\)-values using exact conditional enumeration instead of simulated permutations or asymptotic approximations
• Bayes factor based on a maximum statistic for case-control genetic association studies
• Optimization of Two‐Stage Genetic Designs Where Data Are Combined Using an Accurate and Efficient Approximation for Pearson's Statistic
• A Bayesian method for detecting and characterizing allelic heterogeneity and boosting signals in genome-wide association studies
• On combining data from genome-wide association studies to discover disease-associated SNPs
• Case-control studies looking at one gene locus
• Nonparametric iterated combined tests for genetic differentiation
• Calibrated Bayes Factors in Assessing Genetic Association Models
• A model-embedded trend test with incorporating Hardy-Weinberg equilibrium information
• Choosing between per-genotype, per-allele, and trend approaches for initial detection of gene–disease association
• A likelihood ratio test for goodness-of-fit of recessive and dominant models for case-control studies
• A robust distribution-free test for genetic association studies of quantitative traits
• Quantification and graphical methods for DNA fingerprinting
• Association tests through combining \(p\)-values for case control genome-wide association studies
• Optimal multistage designs -- a general framework for efficient genome-wide association studies
• Hybrid Bayes factors for genome-wide association studies when a robust test is used
• A robust genome-wide scan statistic of the Wellcome Trust Case-Control Consortium
• Properties of the Multiallelic Trend Test

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