Motion planning algorithms for molecular simulations: a survey

DOI10.1016/J.COSREV.2012.07.002zbMATH Open1448.92004OpenAlexW2000643286MaRDI QIDQ465699FDOQ465699

Thierry Siméon, Ibrahim Al-Bluwi, Juan Cortés

Publication date: 24 October 2014

Published in: Computer Science Review (Search for Journal in Brave)

Full work available at URL: https://hal.laas.fr/hal-01982596/file/12CSR_AlBluwi.pdf

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zbMATH Keywords

motion planningmolecular simulationsprotein foldingprotein flexibilityprotein-ligand interactionssampling-based algorithms

Mathematics Subject Classification ID

Biochemistry, molecular biology (92C40) Systems biology, networks (92C42) Research exposition (monographs, survey articles) pertaining to biology (92-02) Computational methods for problems pertaining to biology (92-08)

Cites Work

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• On the “piano movers'” problem I. The case of a two-dimensional rigid polygonal body moving amidst polygonal barriers
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• Efficient Collision Detection of Complex Deformable Models using AABB Trees
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• A path planning-based study of protein folding with a case study of hairpin formation in protein G and L
• Collision detection for deforming necklaces
• A motion planning approach to studying molecular motions

Cited In (1)

• Identification of probabilistic approaches and map-based navigation in motion planning for mobile robots

Uses Software

• AutoDock
• OBBTree

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