Multiple alignment analysis based on hidden Markov models

zbMATH Open1098.92027MaRDI QIDQ5486820FDOQ5486820

Authors: Zeju Luo, Miao He, Siming Zhu 

Publication date: 15 September 2006

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zbMATH Keywords

multiple sequence alignmentprotein classification

Mathematics Subject Classification ID

Numerical analysis or methods applied to Markov chains (65C40) Biochemistry, molecular biology (92C40)

Cited In (10)

• A hidden Markov model applied to the protein 3D structure analysis
• Statistical mechanics of transcription-factor binding site discovery using hidden Markov models
• Brief introduction to self-adapting hidden Markov model program for multiple sequences alignment
• Pattern recognition methods for advanced stochastic protein sequence analysis using HMMs
• Title not available (Why is that?)
• Optimisation of HMM topologies enhances DNA and protein sequence modelling
• Scoring hidden Markov models to discriminate \(\beta\)-barrel membrane proteins
• Fuzzy measures and integrals in profile hidden Markov models for protein sequence analysis
• Inference with constrained hidden Markov models in PRISM
• A hybrid method for protein sequence modeling with improved accuracy

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