Using informative multinomial-Dirichlet prior in a t-mixture with reversible jump estimation of nucleosome positions for genome-wide profiling
DOI10.1515/SAGMB-2014-0098zbMATH Open1330.92048OpenAlexW2292733224WikidataQ40222516 ScholiaQ40222516MaRDI QIDQ5962702FDOQ5962702
Rawane Samb, Khader Khadraoui, Arnaud Droit, Pascal Belleau, Astrid Deschênes, Lajmi Lakhal-Chaieb
Publication date: 16 February 2016
Published in: Statistical Applications in Genetics and Molecular Biology (Search for Journal in Brave)
Full work available at URL: https://doi.org/10.1515/sagmb-2014-0098
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nucleosome positioningreversible-jump MCMCBayesian t-mixturegenome-wide profilingmultinomial-Dirichlet prior
Bayesian inference (62F15) Applications of statistics to biology and medical sciences; meta analysis (62P10) General biostatistics (92B15) Biochemistry, molecular biology (92C40)
Cites Work
- PICS: Probabilistic Inference for ChIP-seq
- Estimating the dimension of a model
- Reversible jump Markov chain Monte Carlo computation and Bayesian model determination
- Markov chains for exploring posterior distributions. (With discussion)
- Title not available (Why is that?)
- Title not available (Why is that?)
- A non-homogeneous hidden-state model on first order differences for automatic detection of nucleosome positions
- A continuous-index Bayesian hidden Markov model for prediction of nucleosome positioning in genomic DNA
- Using informative multinomial-Dirichlet prior in a t-mixture with reversible jump estimation of nucleosome positions for genome-wide profiling
Cited In (3)
- Using informative multinomial-Dirichlet prior in a t-mixture with reversible jump estimation of nucleosome positions for genome-wide profiling
- Chromatyping: Reconstructing Nucleosome Profiles from NOMe Sequencing Data
- NucPosPred: predicting species-specific genomic nucleosome positioning via four different modes of general PseKNC
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