Nonlinear molecular excitations in a completely inhomogeneous DNA chain
From MaRDI portal
Publication:717062
DOI10.1016/J.PHYSLETA.2008.05.063zbMATH Open1221.92038arXiv0807.2506OpenAlexW2129587704MaRDI QIDQ717062FDOQ717062
Publication date: 27 September 2011
Published in: Physics Letters. A (Search for Journal in Brave)
Abstract: We study the nonlinear dynamics of a completely inhomogeneous DNA chain which is governed by a perturbed sine-Gordon equation. A multiple scale perturbation analysis provides perturbed kink-antikink solitons to represent open state configuration with small fluctuation. The perturbation due to inhomogeneities changes the velocity of the soliton. However, the width of the soliton remains constant.
Full work available at URL: https://arxiv.org/abs/0807.2506
Recommendations
- Soliton excitations in an inhomogeneous DNA molecular chain
- Perturbed soliton excitations in the DNA double helix
- Perturbed soliton-like molecular excitations in a deformed DNA chain
- Propagation of twist solitons in fully inhomogeneous DNA chains
- Soliton propagation in homogeneous and inhomogeneous models for DNA torsion dynamics
Biochemistry, molecular biology (92C40) Dynamical systems in biology (37N25) Soliton solutions (35C08) Biophysics (92C05)
Cites Work
- The Inverse Scattering Transform‐Fourier Analysis for Nonlinear Problems
- Title not available (Why is that?)
- Compacton-like modes in model DNA systems and their bearing on biological functioning
- A coupled base-rotator model for structure and dynamics of DNA -- local fluctuations in helical twist angles and topological solitons.
- The possible role of solitonic processes during A to B conformational changes in DNA
- Long-range interactions of solitons in a double chain
- Perturbed soliton excitations in the DNA double helix
- On a Toda lattice model with a transversal degree of freedom
- Nonlinear DNA dynamics: Hierarchy of the models
- Soliton excitation in the DNA double helix
- Linear stability analysis for the multikink solution of the sine-Hilbert equation
Cited In (9)
- DNA Torsional Solitons in the Presence of Localized Inhomogeneities
- Perturbed soliton-like molecular excitations in a deformed DNA chain
- Nonlinear dynamics of DNA systems with inhomogeneity effects
- Delocalization of mechanical waves in the ladder chain of DNA with correlated disorder
- Propagation of Twist Solitons in Fully Inhomogeneous DNA Chains
- Effect of twist inhomogeneity on soliton spin excitations in a helimagnet
- Long-range interactions between adjacent and distant bases in a DNA and their impact on the ribonucleic acid polymerase-DNA dynamics
- Dynamic of DNA's possible impact on its damage
- Solitons in antiferroelectric liquid crystal and Josephson junction: the double sine-Gordon model
This page was built for publication: Nonlinear molecular excitations in a completely inhomogeneous DNA chain
Report a bug (only for logged in users!)Click here to report a bug for this page (MaRDI item Q717062)
