Hybrid discrete/continuum algorithms for stochastic reaction networks
DOI10.1016/J.JCP.2014.10.026zbMATH Open1351.80014OpenAlexW2010337690WikidataQ115041772 ScholiaQ115041772MaRDI QIDQ728748FDOQ728748
Bert Debusschere, Habib N. Najm, Khachik Sargsyan, Cosmin Safta
Publication date: 20 December 2016
Published in: Journal of Computational Physics (Search for Journal in Brave)
Full work available at URL: https://doi.org/10.1016/j.jcp.2014.10.026
Fokker-Planck equationfinite volumechemical master equationflux splittinghybrid discrete-continuum models
Numerical solutions to stochastic differential and integral equations (65C30) Finite volume methods for initial value and initial-boundary value problems involving PDEs (65M08) Chemically reacting flows (80A32) Finite volume methods applied to problems in thermodynamics and heat transfer (80M12)
Cites Work
- Title not available (Why is that?)
- Title not available (Why is that?)
- Title not available (Why is that?)
- Finite Volume Methods for Hyperbolic Problems
- High resolution schemes for hyperbolic conservation laws
- Weak solutions of nonlinear hyperbolic equations and their numerical computation
- Towards the ultimate conservative difference scheme. V. A second-order sequel to Godunov's method
- Handbook of stochastic methods for physics, chemistry and natural sciences.
- Multiscale stochastic simulation algorithm with stochastic partial equilibrium assumption for chemically reacting systems
- A multiple time interval finite state projection algorithm for the solution to the chemical master equation
- Multiscale Modeling of Chemical Kinetics via the Master Equation
- Adaptive Discrete Galerkin Methods Applied to the Chemical Master Equation
- The Finite State Projection Approach for the Analysis of Stochastic Noise in Gene Networks
- Fokker–Planck approximation of the master equation in molecular biology
- Spectral approximation of solutions to the chemical master equation
- Solving chemical master equations by adaptive wavelet compression
- Hybrid method for the chemical master equation
- Nested stochastic simulation algorithms for chemical kinetic systems with multiple time scales
- Inexact Uniformization Method for Computing Transient Distributions of Markov Chains
- A modified uniformization method for the solution of the chemical master equation
- Chemical master equation and Langevin regimes for a gene transcription model
- A solver for the stochastic master equation applied to gene regulatory networks
- A new look at the chemical master equation
- Radial basis function collocation for the chemical master equation
Cited In (9)
- Approximation and inference methods for stochastic biochemical kinetics—a tutorial review
- An algebraic method to calculate parameter regions for constrained steady-state distribution in stochastic reaction networks
- Estimating the basic reproductive number during the early stages of an emerging epidemic
- Hybrid framework for the simulation of stochastic chemical kinetics
- Hybrid Markov chain models of S-I-R disease dynamics
- Algebraic stabilization of explicit numerical integration for extremely stiff reaction networks
- Heteroclinic cycling and extinction in May-Leonard models with demographic stochasticity
- Modelling Stochastic and Deterministic Behaviours in Virus Infection Dynamics
- A hybrid epidemic model to explore stochasticity in COVID-19 dynamics
Uses Software
This page was built for publication: Hybrid discrete/continuum algorithms for stochastic reaction networks
Report a bug (only for logged in users!)Click here to report a bug for this page (MaRDI item Q728748)
