A sparse conditional Gaussian graphical model for analysis of genetical genomics data
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Publication:80801
DOI10.1214/11-aoas494zbMath1234.62151arXiv1202.6515OpenAlexW2018747370WikidataQ34384169 ScholiaQ34384169MaRDI QIDQ80801
Jianxin Yin, Hongzhe Li, Hongzhe Li, Jianxing Yin
Publication date: 1 December 2011
Published in: The Annals of Applied Statistics (Search for Journal in Brave)
Full work available at URL: https://arxiv.org/abs/1202.6515
Estimation in multivariate analysis (62H12) Applications of statistics to biology and medical sciences; meta analysis (62P10) Applications of graph theory (05C90) Monte Carlo methods (65C05) Biochemistry, molecular biology (92C40) Genetics and epigenetics (92D10)
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Uses Software
Cites Work
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- A sparse conditional Gaussian graphical model for analysis of genetical genomics data
- Sparse inverse covariance estimation with the graphical lasso
- The Adaptive Lasso and Its Oracle Properties
- Causal graphical models in systems genetics: a unified framework for joint inference of causal network and genetic architecture for correlated phenotypes
- Sparsistency and rates of convergence in large covariance matrix estimation
- Network exploration via the adaptive LASSO and SCAD penalties
- High-dimensional graphs and variable selection with the Lasso
- Gradient directed regularization for sparse Gaussian concentration graphs, with applications to inference of genetic networks
- Partial Correlation Estimation by Joint Sparse Regression Models
- Tuning parameter selectors for the smoothly clipped absolute deviation method
- Statistical Methods for Expression Quantitative Trait Loci (eQTL) Mapping
- An Efficient Method of Estimating Seemingly Unrelated Regressions and Tests for Aggregation Bias
