A vectorized method of importance sampling with applications to models of mutation and migration

DOI10.1016/S0040-5809(02)00007-2zbMATH Open1102.92041WikidataQ46140817 ScholiaQ46140817MaRDI QIDQ851297FDOQ851297

Authors Montgomery Slatkin

Publication date 20 November 2006

Published in Theoretical Population Biology (Search for Journal in Brave)

zbMATH Keywords

Coalescent theoryGene flowLikelihoodMicrosatellites

Mathematics Subject Classification ID

Problems related to evolution (92D15) Applications of branching processes (60J85)

Recommendations

• Stepwise mutation likelihood computation by sequential importance sampling in subdivided population models
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• Importance sampling on coalescent histories. I
• Inference in Molecular Population Genetics
• Simulating probability distributions in the coalescent

Cites work

• Inference in Molecular Population Genetics
• Rare alleles and selection.
• Simulating probability distributions in the coalescent
• The sampling theory of selectively neutral alleles

Cited in

(13)

• Importance sampling on coalescent histories. I
• Experiments with the site frequency spectrum
• Importance sampling on coalescent histories. II: Subdivided population models
• A note on the accuracy of PAC-likelihood inference with microsatellite data
• Quasi-Monte Carlo method in population genetics parameter estimation
• Stepwise mutation likelihood computation by sequential importance sampling in subdivided population models
• High mutation rate loci in a subdivided population
• Visualizations for Genetic Assignment Analyses Using the Saddlepoint Approximation Method
• A simple method for computing exact probabilities of mutation numbers
• Inference on microsatellite mutation processes in the invasive mite, varroa destructor, using reversible jump Markov chain Monte Carlo
• Importance sampling and the two-locus model with subdivided population structure
• Finding the best resolution for the Kingman-Tajima coalescent: theory and applications
• Simulation algorithms for integrals of a class of sampling distributions arising in population genetics

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