Brownian models and coalescent structures

DOI10.1016/J.TPB.2003.11.002zbMATH Open1109.92027OpenAlexW2014311198WikidataQ52000023 ScholiaQ52000023MaRDI QIDQ851374FDOQ851374

Authors: M. G. B. Blum, Christophe Damerval, Stephanie Manel, Olivier Francois 

Publication date: 20 November 2006

Published in: Theoretical Population Biology (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.tpb.2003.11.002

Recommendations

• A consistent estimator of the evolutionary rate
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• Maximum likelihood estimation for birth and multidimensional Brownian process
• Kingman's coalescent and Brownian motion
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zbMATH Keywords

Brownian motionCoalescent theoryMicrosatellite evolutionPairwise statisticPseudomaximum-likelihoodSpatial dispersal

Mathematics Subject Classification ID

Markov processes: estimation; hidden Markov models (62M05) Applications of statistics to biology and medical sciences; meta analysis (62P10) Numerical analysis or methods applied to Markov chains (65C40) Applications of mathematical programming (90C90) Problems related to evolution (92D15) Dynamic programming (90C39)

Cites Work

• The coalescent
• Maximum likelihood estimation of a migration matrix and effective population sizes in \(n\) subpopulations by using a coalescent approach
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• The stepping stone model: New formulas expose old myths
• Ancestral inference in population genetics
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• Statistics for microsatellite variation based on coalescence
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• Some statistical improvements for estimating population size and mutation rate from segregating sites in DNA sequences
• When and where was the most recent common ancestor?

Cited In (7)

• A consistent estimator of the evolutionary rate
• Kingman's coalescent and Brownian motion
• On the length distribution of external branches in coalescence trees: Genetic diversity within species
• No BLUE among phylogenetic estimators
• Coalescent models derived from birth-death processes
• Assessing phenotypic correlation through the multivariate phylogenetic latent liability model
• Hidden Markov random fields and the genetic structure of the Scandinavian brown bear population

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