Modeling and computation of two phase geometric biomembranes using surface finite elements

From MaRDI portal

Publication:995274

Jump to:navigation, search

DOI10.1016/j.jcp.2010.05.014zbMath1425.74323OpenAlexW2125344654MaRDI QIDQ995274

Björn Stinner, Charles M. Elliott

Publication date: 13 September 2010

Published in: Journal of Computational Physics (Search for Journal in Brave)

Full work available at URL: http://wrap.warwick.ac.uk/5509/1/WRAP_stinner_0772844-ma-260811-twophasebiomembrane_num.pdf

zbMATH Keywords

numerical simulation phase field method lipid bilayer multi-component membrane relaxation dynamics surface finite element method

Mathematics Subject Classification ID

Finite element methods applied to problems in solid mechanics (74S05) Biomechanical solid mechanics (74L15)

Related Items

Lp -approximations for solutions of parabolic differential equations on manifolds, Arbitrary Lagrangian-Eulerian finite element method for curved and deforming surfaces. I: General theory and application to fluid interfaces, A semi-implicit finite element method for viscous lipid membranes, Finite element approximation of large bending isometries, On the sharp interface limit of a phase field model for near spherical two phase biomembranes, A Convergent Point Integral Method for Isotropic Elliptic Equations on a Point Cloud, Adaptive discontinuous Galerkin methods on surfaces, A variational approach to particles in lipid membranes, Modeling of multicomponent three-dimensional vesicles, A stable numerical method for the dynamics of fluidic membranes, Virtual Element Method for the Laplace-Beltrami equation on surfaces, Passing from bulk to bulk-surface evolution in the Allen-Cahn equation, Kinks in two-phase lipid bilayer membranes, An isogeometric finite element formulation for phase transitions on deforming surfaces, Global minimizers for the doubly-constrained Helfrich energy: the axisymmetric case, An efficient collocation method for long-time simulation of heat and mass transport on evolving surfaces, Regularity of the obstacle problem for the parabolic biharmonic equation, An ALE ESFEM for solving PDEs on evolving surfaces, The obstacle problem for a fourth order semilinear parabolic equation, A priori error analysis for an isogeometric discontinuous Galerkin approximation for convection problems on surfaces, Kernel-based methods for solving time-dependent advection-diffusion equations on manifolds, A second-order nonlocal approximation for Poisson model with Dirichlet boundary, Shape dynamics of capsules in two phase-shifted orthogonal ultrasonic standing waves: a numerical investigation, “Gradient-free” diffuse approximations of the Willmore functional and Willmore flow, A stabilized finite element formulation for liquid shells and its application to lipid bilayers, A shallow physics-informed neural network for solving partial differential equations on static and evolving surfaces, Derivation and simulation of a two-phase fluid deformable surface model, Multiscale model reduction for the Allen-Cahn problem in perforated domains, Spectral methods for solving elliptic PDEs on unknown manifolds, An adaptive discontinuous finite volume element method for the Allen-Cahn equation, Ghost Point Diffusion Maps for Solving Elliptic PDEs on Manifolds with Classical Boundary Conditions, An evolving space framework for Oseen equations on a moving domain, Finite element approximation for the dynamics of asymmetric fluidic biomembranes, A SCR-based error estimation and adaptive finite element method for the Allen-Cahn equation, A least-squares implicit RBF-FD closest point method and applications to PDEs on moving surfaces, Finite element modeling of a linear membrane shell problem using tangential differential calculus, A finite element method for viscous membranes, A fully Lagrangian meshfree framework for PDEs on evolving surfaces, Kernel-based collocation methods for heat transport on evolving surfaces, The surface finite element method for pattern formation on evolving biological surfaces, Mini-workshop: PDE models of motility and invasion in active biosystems. Abstracts from the mini-workshop held October 22--28, 2017, Unnamed Item, An adaptive octree finite element method for PDEs posed on surfaces, A gauge-fixing procedure for spherical fluid membranes and application to computations, $L^2$-estimates for the evolving surface finite element method, Point Integral Method for Elliptic Equations with Variable Coefficients on Point Cloud, Curve shortening flow coupled to lateral diffusion, Local changes in lipid composition to match membrane curvature, Error estimates for approximations of a gradient dynamics for phase field elastic bending energy of vesicle membrane deformation, Error analysis for full discretizations of quasilinear parabolic problems on evolving surfaces, An unconditionally energy-stable second-order time-accurate scheme for the Cahn-Hilliard equation on surfaces, Evolving surface finite element method for the Cahn-Hilliard equation, Hybridizable discontinuous Galerkin and mixed finite element methods for elliptic problems on surfaces, A finite element method for Allen-Cahn equation on deforming surface, A multiscale approach to curvature modulated sorting in biological membranes, Convergence of the point integral method for Laplace-Beltrami equation on point cloud, A narrow-band unfitted finite element method for elliptic PDEs posed on surfaces, PDEs on moving surfaces via the closest point method and a modified grid based particle method, Analysis of an iterative scheme of fractional steps type associated to the reaction-diffusion equation endowed with a general nonlinearity and Cauchy-Neumann boundary conditions, Small deformations of spherical biomembranes, A coupled surface-Cahn–Hilliard bulk-diffusion system modeling lipid raft formation in cell membranes, On Curvature Driven Rotational Diffusion of Proteins on Membrane Surfaces, Gradient flow dynamics of two-phase biomembranes: Sharp interface variational formulation and finite element approximation, Computational Parametric Willmore Flow with Spontaneous Curvature and Area Difference Elasticity Effects, Finite element methods for fourth order axisymmetric geometric evolution equations, A Convergent evolving finite element algorithm for Willmore flow of closed surfaces, Observer-invariant time derivatives on moving surfaces, A new diffuse-interface approximation of the Willmore flow, High Order Discontinuous Galerkin Methods for Elliptic Problems on Surfaces, Domain formation via phase separation for spherical biomembranes with small deformations, A numerical method for simulation dynamics of incompressible lipid membranes in viscous fluid, Poincaré inequality for a mesh-dependent 2-norm on piecewise linear surfaces with boundary, A benchmark for the surface Cahn-Hilliard equation, Graph-based prior and forward models for inverse problems on manifolds with boundaries

Uses Software

Cites Work

Retrieved from "https://portal.mardi4nfdi.de/w/index.php?title=Publication:995274&oldid=12987024"