Cited in
(46)- R package for statistical inference in dynamical systems using kernel based gradient matching: KGode
- Gene regulatory networks. Methods and protocols
- Model selection via marginal likelihood estimation by combining thermodynamic integration and gradient matching
- Parameter uncertainty in biochemical models described by ordinary differential equations
- Estimating Bayes factors via thermodynamic integration and population MCMC
- Using Monte Carlo particle methods to estimate and quantify uncertainty in periodic parameters (research)
- Approximate Bayesian computational methods for the inference of unknown parameters
- The importance and challenges of Bayesian parameter learning in systems biology
- A non-homogeneous dynamic Bayesian network with a hidden Markov model dependency structure among the temporal data points
- Switching and diffusion models for gene regulation networks
- Model-based selection of the robust JAK-STAT activation mechanism
- Statistical inference of regulatory networks for circadian regulation
- Bayesian inference for differential equations
- Bio-PEPA
- WIGGLE
- BRLMM
- PSUADE
- Pi4U
- TORC
- BCM
- epiABC
- EnsembleQN
- gptk
- ABC-SysBio
- deGradInfer
- Diurnal
- PINTS
- SOSlib
- SYSBIONS
- Uncertainpy
- EasyVVUQ
- DAnTE
- PottersWheel
- KGode
- Approximate Bayesian inference in semi-mechanistic models
- Statistical inference in mechanistic models: time warping for improved gradient matching
- Proximal gradient method with automatic selection of the parameter by automatic differentiation
- Korali: efficient and scalable software framework for Bayesian uncertainty quantification and stochastic optimization
- GAMBIT
- APT-MCMC
- Aphros
- Korali
- Mirheo
- Stochastic ordinary differential equations in applied and computational mathematics
- Bayesian parameter identification for Turing systems on stationary and evolving domains
- Fast approximate Bayesian computation for estimating parameters in differential equations
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