swMATH31865MaRDI QIDQ43576FDOQ43576
Author name not available (Why is that?)
Official website: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5600148/#!po=15.6250
Source code repository: https://github.com/COMBINE-lab/Salmon
Cited In (76)
- A tale of optimizing the space taken by de Bruijn graphs
- SSP
- IsoLasso
- ShoRAH
- Probabilistic models of \(k\)-mer frequencies (extended abstract)
- Model-based feature selection and clustering of RNA-seq data for unsupervised subtype discovery
- BiocManager
- ARSyN
- AUGUSTUS
- GATK
- Quake
- FASTX
- SnpEff
- BSgenome
- RSEM
- Gviz
- Trimmomatic
- sva
- TFBSTools
- tspair
- gage
- HISAT
- Tabix
- QuasR
- GenomicRanges
- DARRC
- systemPipeR
- SNVMix
- eSNV-detect
- HaploReg
- MapSplice
- MultiQC
- PALMapper
- ReQON
- SomaticSniper
- Strelka
- topGO
- Wileup
- ZOOM
- RapMap
- Yanagi
- RNASeqReadSimulator
- PePr
- CLIIQ
- Safety and completeness in flow decompositions for RNA assembly
- KmerStream
- BiSeq
- compGenomRData
- deFuse
- genomation
- gmapR
- GISTIC2.0
- iClusterPlus
- MAnorm
- MethylSeekR
- normr
- ODIN
- Rbowtie
- rGADEM
- rGREAT
- Trim Galore
- FSCseq
- NB.MClust
- CIDANE
- IDBA
- MFD-ILP
- MultiTrans
- RefShannon
- Scallop2
- StringTie
- intePareto
- Analysis of expression profile and gene variation via development of methods for next generation sequencing data
- Modeling between-study heterogeneity for improved replicability in gene signature selection and clinical prediction
- Computational genomics with R. With the assistance of Verdan Franke, Bora Uyar and Jonathan Ronen
- Fast, flexible, and exact minimum flow decompositions via ILP
- Yanagi: transcript segment library construction for RNA-seq quantification
This page was built for software: Salmon
