ZIFA
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Cited in
(34)- netNMF-sc
- HeteroGGM
- Two directional Laplacian pyramids with application to data imputation
- BASiCS
- Two-way sparsity for time-varying networks with applications in genomics
- A compositional model to assess expression changes from single-cell RNA-seq data
- Sparse principal component analysis with missing observations
- PoiClaClu
- Model-based approach to the joint analysis of single-cell data on chromatin accessibility and gene expression
- CERENA
- SpectralCAT
- SC3
- ppcor
- AutoClass@IJM
- A unified statistical framework for single cell and bulk RNA sequencing data
- SCENIC
- SCODE
- MAST
- CIDR
- scRNAseq
- powsimR
- SNN-Cliq
- zinbwave
- PLNseq
- BPSC
- A hierarchical Bayesian model for single-cell clustering using RNA-sequencing data
- Exponential-Family Embedding With Application to Cell Developmental Trajectories for Single-Cell RNA-Seq Data
- A kernel non-negative matrix factorization framework for single cell clustering
- DIMM-SC
- Model-Based Microbiome Data Ordination: A Variational Approximation Approach
- Kinetic Foundation of the Zero-Inflated Negative Binomial Model for Single-Cell RNA Sequencing Data
- BLGGM
- Clustering sparse binary data with hierarchical Bayesian Bernoulli mixture model
- Robust calibration of hierarchical population models for heterogeneous cell populations
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