Evolving interfaces via gradients of geometry-dependent interior Poisson problems: application to tumor growth

DOI10.1016/J.JCP.2004.08.010zbMath1067.65111OpenAlexW2117717768WikidataQ57991011 ScholiaQ57991011MaRDI QIDQ706832

Paul Macklin, John S. Lowengrub

Publication date: 9 February 2005

Published in: Journal of Computational Physics (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.jcp.2004.08.010

zbMATH Keywords

algorithmnumerical examplesimage processingGaussian filterMoving boundary problemsFinite differencesLevel set methodTumor growthGhost fluid methodCurvature discretizationInterior Poisson problemSecond-order accuracyVelocity extension

Mathematics Subject Classification ID

Biomedical imaging and signal processing (92C55) Laplace operator, Helmholtz equation (reduced wave equation), Poisson equation (35J05) Free boundary problems for PDEs (35R35) Finite difference methods for boundary value problems involving PDEs (65N06)

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Cites Work

• Unnamed Item
• Unnamed Item
• Unnamed Item
• Nonlinear simulation of tumor necrosis, neo-vascularization and tissue invasion via an adaptive finite-element/level-set method
• A fourth order accurate discretization for the Laplace and heat equations on arbitrary domains, with applications to the Stefan problem
• Evolving interfaces via gradients of geometry-dependent interior Poisson problems: application to tumor growth
• A fast level set based algorithm for topology-independent shape modeling.
• Fronts propagating with curvature-dependent speed: Algorithms based on Hamilton-Jacobi formulations
• A numerical method for two phase flow with an unstable interface
• The fast construction of extension velocities in level set methods
• A non-oscillatory Eulerian approach to interfaces in multimaterial flows (the ghost fluid method)
• A simple level set method for solving Stefan problems
• Modelling the role of cell-cell adhesion in the growth and development of carcinomas
• Nonlinear simulation of tumor growth
• A level set approach for the numerical simulation of dendritic growth
• A second-order-accurate symmetric discretization of the Poisson equation on irregular domains
• Growth of necrotic tumors in the presence and absence of inhibitors
• A PDE-based fast local level set method
• Efficient implementation of weighted ENO schemes
• A variational level set approach to multiphase motion
• An improved level set method for incompressible two-phase flows
• A boundary condition capturing method for Poisson's equation on irregular domains
• Strong Stability-Preserving High-Order Time Discretization Methods
• Numerical Linear Algebra for High-Performance Computers
• An Efficient, Interface-Preserving Level Set Redistancing Algorithm and Its Application to Interfacial Incompressible Fluid Flow
• Total variation diminishing Runge-Kutta schemes
• Weighted ENO Schemes for Hamilton--Jacobi Equations
• Cancer Modelling and Simulation

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