Generic properties of combinatory maps: Neutral networks of RNA secondary structures

DOI10.1007/BF02462007zbMath0925.92006OpenAlexW3124837637WikidataQ56992053 ScholiaQ56992053MaRDI QIDQ1361441

Peter F. Stadler, Peter Schuster, Christian M. Reidys

Publication date: 18 October 1999

Published in: Bulletin of Mathematical Biology (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1007/bf02462007

Mathematics Subject Classification ID

Biology and other natural sciences (92-XX)

Related Items (21)

Mutate now, die later. Evolutionary dynamics with delayed selection ⋮ Local connectivity of neutral networks ⋮ NEUTRAL EVOLUTION AND MUTATION RATES OF SEQUENTIAL DYNAMICAL SYSTEMS ⋮ Random induced subgraphs of generalized \(n\)-cubes ⋮ Topological classification and enumeration of RNA structures by genus ⋮ An \textit{in silico} exploration of the neutral network in protein sequence space ⋮ RNA structures with pseudo-knots: graph-theoretical, combinatorial, and statistical properties ⋮ Selection for mutational robustness in finite populations ⋮ Percolation on fitness landscapes: effects of correlation, phenotype, and incompatibilities ⋮ NEUTRAL NETWORKS OF INTERACTING RNA SECONDARY STRUCTURES ⋮ Neutrality in fitness landscapes. ⋮ Chance and necessity in evolution: lessons from RNA ⋮ A simple model of co-evolutionary dynamics caused by epistatic selection ⋮ Neutral networks of sequence to shape maps ⋮ Dynamic landscapes: a model of context and contingency in evolution ⋮ Combinatorial design of pseudoknot RNA ⋮ Large components in random induced subgraphs of \(n\)-cubes ⋮ GENETIC REPRESENTATION AND GENETIC NEUTRALITY IN GENE EXPRESSION PROGRAMMING ⋮ On realizing shapes in the theory of RNA neutral networks ⋮ Elements of a theory of computer simulation. I ⋮ Fast Fourier transform for fitness landscapes

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• RNA secondary structures and their prediction
• Replication and mutation on neutral networks
• Largest random component of a k-cube
• Evolution in a flat fitness landscape
• Combinatorics of RNA secondary structures
• Algorithms for Loop Matchings
• Landscapes: Complex optimization problems and biopolymer structures
• Optimal numberings and isoperimetric problems on graphs

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