Topological classification and enumeration of RNA structures by genus
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Publication:378306
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- A direct bijection for the Harer-Zagier formula
- Analytic combinatorics
- Combinatorial Computational Biology of RNA
- Combinatorial aspects of continued fractions
- Combinatorial landscapes
- Combinatorics of RNA Hairpins and Cloverleaves
- Computation of Generating Functions for Biological Molecules
- Factoring \(n\)-cycles and counting maps of given genus
- Fatgraph models of proteins
- Finite type invariants and fatgraphs
- Generic properties of combinatory maps: Neutral networks of RNA secondary structures
- Invariant tensor formulas via chord diagrams
- Large components in random induced subgraphs of \(n\)-cubes
- Lie algebras and the four color theorem
- Linear trees and RNA secondary structure
- Modular, \(k\)-noncrossing diagrams
- On the Vassiliev knot invariants
- Perturbative series and the moduli space of Riemann surfaces
- Quantization of the algebra of chord diagrams
- RNA folding and large \(N\) matrix theory
- RNA structures with pseudo-knots: graph-theoretical, combinatorial, and statistical properties
- Random induced subgraphs of Cayley graphs induced by transpositions
- Replication and mutation on neutral networks
- Sequence of operations analysis for dynamic data structures
- Spaces of RNA secondary structures
- The Euler characteristic of the moduli space of curves
- The Poisson structure on the moduli space of flat connections and chord diagrams
- The asymptotic number of tree-rooted maps on a surface
- The decorated Teichmüller space of punctured surfaces
- Weil-Petersson volumes
Cited in
(18)- Generation of RNA pseudoknot structures with topological genus filtration
- Topological recursion for Gaussian means and cohomological field theories
- Statistics of topological RNA structures
- On a uniformly random chord diagram and its intersection graph
- Topological language for RNA
- On RNA-RNA interaction structures of fixed topological genus
- Loop homology of bi-secondary structures. II
- Moduli spaces and macromolecules
- Topological Classification of RNA Structures via Intersection Graph
- Loop homology of bi-secondary structures
- Shapes of topological RNA structures
- Models of discretized moduli spaces, cohomological field theories, and Gaussian means
- Plane permutations and applications to a result of Zagier-Stanley and distances of permutations
- The block spectrum of RNA pseudoknot structures
- Regular simple queues of protein contact maps
- Genus ranges of chord diagrams
- Enumeration of 4-regular one-face maps
- Spaces of RNA secondary structures
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