Coalescence in a random background.

DOI10.1214/105051604000000099zbMath1060.60100arXivmath/0406174OpenAlexW1983128758MaRDI QIDQ1879889

Anja Sturm, Alison M. Etheridge, Nick H. Barton

Publication date: 15 September 2004

Published in: The Annals of Applied Probability (Search for Journal in Brave)

Full work available at URL: https://arxiv.org/abs/math/0406174

zbMATH Keywords

selectionrandom environmentrecombinationidentity by descentCoalescent

Mathematics Subject Classification ID

Applications of branching processes (60J85) Interacting random processes; statistical mechanics type models; percolation theory (60K35) Diffusion processes (60J60) Processes in random environments (60K37) Branching processes (Galton-Watson, birth-and-death, etc.) (60J80) Applications of Brownian motions and diffusion theory (population genetics, absorption problems, etc.) (60J70)

Related Items (23)

Coalescence in a random background. ⋮ Multi-site adaptation in the presence of infrequent recombination ⋮ Looking down in the ancestral selection graph: a probabilistic approach to the common ancestor type distribution ⋮ Asymptotic behavior of a Moran model with mutations, drift and recombination among multiple loci ⋮ Developments in coalescent theory from single loci to chromosomes ⋮ The conditional ancestral selection graph with strong balancing selection ⋮ Tree-valued Fleming-Viot dynamics with mutation and selection ⋮ Lines of descent in a Moran model with frequency-dependent selection and mutation ⋮ An estimator for the recombination rate from a continuously observed diffusion of haplotype frequencies ⋮ Sampling HIV intrahost genealogies based on a model of acute stage CTL response ⋮ The common ancestor process revisited ⋮ Selective sweeps for recessive alleles and for other modes of dominance ⋮ The effect of recurrent mutation on the linkage disequilibrium under a selective sweep ⋮ The coalescence of intrahost HIV lineages under symmetric CTL attack ⋮ Branching-coalescing particle systems ⋮ An approximate sampling formula under genetic hitchhiking ⋮ Genealogical distances under low levels of selection ⋮ Time reversal of some stationary jump diffusion processes from population genetics ⋮ Editorial: Coalescent theory has many new branches ⋮ The effect of fluctuating selection on the genealogy at a linked site ⋮ Genealogies in bistable waves ⋮ A coalescent model for the effect of advantageous mutations on the genealogy of a population ⋮ Random partitions approximating the coalescence of lineages during a selective sweep

Cites Work

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• A numerical method for calculating moments of coalescent times in finite populations with selection
• The coalescent and genealogical process in geographically structured population
• The coalescent
• Ancestral processes with selection
• Neutral evolution in spatially continuous populations.
• Genealogical processes for Fleming-Viot models with selection and recombination
• Coalescence in a random background.

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