scientific article; zbMATH DE number 1750184
From MaRDI portal
Publication:4532845
zbMath1004.62088MaRDI QIDQ4532845
Matthew J. Callow, Yee Hwa Yang, Sandrine Dudoit, Terence P. Speed
Publication date: 16 February 2003
Title: zbMATH Open Web Interface contents unavailable due to conflicting licenses.
normalizationimage analysismultiple testingadjusted p-valuedifferential gene expressionDNA microarraypermutation test
Nonparametric hypothesis testing (62G10) Applications of statistics to biology and medical sciences; meta analysis (62P10) Biochemistry, molecular biology (92C40) Genetics and epigenetics (92D10)
Related Items (67)
Determining and analyzing differentially expressed genes from cDNA microarray experiments with complementary designs ⋮ Analyzing factorial designed microarray experiments ⋮ Modeling Microarray Data Using a Threshold Mixture Model ⋮ Simultaneous confidence intervals for differential gene expressions ⋮ Sparse matrix linear models for structured high-throughput data ⋮ Multi-group cancer outlier differential gene expression detection ⋮ Treatment of Microarray Experiments as Split-Plot Designs ⋮ Statistical analysis of the Shapley value for microarray games ⋮ Selecting features in microarray classification using roc curves ⋮ A multivariate empirical Bayes statistic for replicated microarray time course data ⋮ A statistical methodology to select covariates in high-dimensional data under dependence. Application to the classification of genetic profiles in oncology ⋮ A statistical method for measuring activation of gene regulatory networks ⋮ Privacy preserving feature selection and multiclass classification for horizontally distributed data ⋮ Segmenting microarray images using a contour-based method ⋮ Testing multivariate economic restrictions using quantiles: the example of Slutsky negative semidefiniteness ⋮ Patterns of differential expression by association in omic data using a new measure based on ensemble learning ⋮ A Bayesian Framework for Statistical Inference from Gene Expression Data ⋮ Expression profiles in the progression of ductal carcinoma in the breast ⋮ Signaling perturbations induced by invading \textit{H. pylori} proteins in the host epithelial cells: a mathematical modeling approach ⋮ Evaluation of false discovery rate and power via sample size in microarray studies ⋮ Statistical analysis of C‐DNA microarray data for sample clustering and gene identification ⋮ Resampling-based multiple testing for microarray data analysis (With comments) ⋮ Statistical challenges in functional genomics. (With comments and a rejoinder). ⋮ Multiple hypothesis testing in microarray experiments. ⋮ Estimation procedures for the false discovery rate: a systematic comparison for microarray data ⋮ Genomic outlier profile analysis: mixture models, null hypotheses, and nonparametric estimation ⋮ Gene profiling for determining pluripotent genes in a time course microarray experiment ⋮ Regularized Sandwich Estimators for Analysis of High-Dimensional Data Using Generalized Estimating Equations ⋮ A statistical framework for the analysis of microarray probe-level data ⋮ A look at multiplicity through misclassification ⋮ Spatial Correlation of Gene Expression Measures in Tissue Microarray Core Analysis ⋮ Hadamard matrix methods in identifying differentially expressed genes from microarray experi\-ments ⋮ Transformations, background estimation, and process effects in the statistical analysis of microarrays ⋮ A new class of mixture models for differential gene expression in DNA microarray data ⋮ A two-stage empirical Bayes method for identifying differentially expressed genes ⋮ A permutation test motivated by microarray data analysis ⋮ Balancing type one and two errors in multiple testing for differential expression of genes ⋮ A robust unified approach to analyzing methylation and gene expression data ⋮ Exploration of distributional models for a novel intensity-dependent normalization procedure in censored gene expression data ⋮ Joint adaptive mean-variance regularization and variance stabilization of high dimensional data ⋮ An optimal choice of window width for LOWESS normalization of microarray data ⋮ A statistical framework for testing functional categories in microarray data ⋮ Intensity-dependent normalization in microarray analysis: a note of concern ⋮ Sequential prediction bounds for identifying differentially expressed genes in replicated microarray experiments ⋮ Assessing Differential Gene Expression with Small Sample Sizes in Oligonucleotide Arrays Using a Mean‐Variance Model ⋮ ChIP‐chip: Data, Model, and Analysis ⋮ MAOSA: A new procedure for detection of differential gene expression ⋮ Gaga: a parsimonious and flexible model for differential expression analysis ⋮ Extracting gene regulation information for cancer classification ⋮ A perceptually optimised bivariate visualisation scheme for high-dimensional fold-change data ⋮ Optimal feature selection for sparse linear discriminant analysis and its applications in gene expression data ⋮ Selecting Differentially Expressed Genes from Microarray Experiments ⋮ Power and stability comparisons of multiple testing procedures with false discovery rate control ⋮ Bayesian Robust Inference for Differential Gene Expression in Microarrays with Multiple Samples ⋮ Statistical Methods for Expression Quantitative Trait Loci (eQTL) Mapping ⋮ Simultaneous rank tests for detecting differentially expressed genes ⋮ Identifying differentially expressed genes in dye-swapped microarray experiments of small sample size ⋮ Class prediction and gene selection for DNA microarrays using regularized sliced inverse regression ⋮ New normalization methods using support vector machine quantile regression approach in microarray analysis ⋮ sma ⋮ Detecting Gene Regulatory Networks from Microarray Data Using Fuzzy Logic ⋮ The Clustering of Regression Models Method with Applications in Gene Expression Data ⋮ Nonparametric Inference for Local Extrema with Application to Oligonucleotide Microarray Data in Yeast Genome ⋮ Robust Semiparametric Microarray Normalization and Significance Analysis ⋮ Computational Biology: Toward Deciphering Gene Regulatory Information in Mammalian Genomes ⋮ Thresholding rules for recovering a sparse signal from microarray experiments ⋮ A systematic statistical linear modeling approach to oligonucleotide array experiments
Uses Software
This page was built for publication: