A study in nucleated polymerization models of protein aggregation

DOI10.1016/J.AML.2014.09.007MaRDI QIDQ2343704zbMATH OpenOpenAlexDBLPWikidataFDO

Authors Jason K. Davis, Suzanne S. Sindi

Publication date 6 May 2015

Published in Applied Mathematics Letters (Search for Journal in Brave)

Copyright license Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International

Full work available at URL https://doi.org/10.1016/j.aml.2014.09.007

zbMATH Keywords

generating functiondifference equationnucleated polymerizationprionsprotein aggregates

Mathematics Subject Classification ID

Biochemistry, molecular biology (92C40)

Recommendations

• Modelling and analysis of protein aggregation -- competing pathways in prion (PrP) polymerisation
• A mathematical model of the dynamics of prion aggregates with chaperone-mediated fragmentation
• A qualitative model for aggregation-fragmentation and diffusion of -amyloid in Alzheimer's disease
• A continuous-time mathematical model and discrete approximations for the aggregation of \(\beta \)-amyloid
• A qualitative model for aggregation and diffusion of \(\beta \)-amyloid in Alzheimer's disease

Cites work

• A mathematical analysis of the dynamics of prion proliferation
• Analysis of a model for the dynamics of prions
• Analysis of a model for the dynamics of prions. II
• From the discrete to the continuous coagulation–fragmentation equations
• Scaling limit of a discrete prion dynamics model
• The Beker--Döring System and Its Lifshitz--Slyozov Limit
• The shape of the polymerization rate in the prion equation

Cited in

(22)

• Determination of critical nucleation number for a single nucleation amyloid-\(\beta\) aggregation model
• Estimation from moments measurements for amyloid depolymerisation
• Mathematical aspects of the kinetics of formation and degradation of linear peptide or protein aggregates
• Analysis of a prion proliferation model with polymer coagulation in the presence of chaperone
• High-order WENO scheme for polymerization-type equations
• Fragmentation and monomer lengthening of rod-like polymers, a relevant model for prion proliferation
• A mathematical model of the dynamics of prion aggregates with chaperone-mediated fragmentation
• Weak solution and qualitative behavior of a prion proliferation model in the presence of chaperone
• An accurate numerical solution to the kinetics of breakable filament assembly
• Conservative finite volume method on deforming geometries: the case of protein aggregation in dividing yeast cells
• Polymer physics of nuclear organization and function
• scientific article; zbMATH DE number 7380538 (Why is no real title available?)
• A mathematical approach to molecular organization and proteolytic disintegration of bacterial inclusion bodies
• Dynamics of prion proliferation under combined treatment of pharmacological chaperones and interferons
• Generalizing a mathematical model of prion aggregation allows strain coexistence and co-stability by including a novel misfolded species
• Kinetics of the formation of a protein corona around nanoparticles
• Asymptotics of stochastic protein assembly models
• Estimating the rate of prion aggregate amplification in yeast with a generation and structured population model
• A mathematical model of p62-ubiquitin aggregates in autophagy
• scientific article; zbMATH DE number 6282155 (Why is no real title available?)
• Modelling and analysis of protein aggregation -- competing pathways in prion (PrP) polymerisation
• Stochastic calculus of protein filament formation under spatial confinement

This page was built for publication: A study in nucleated polymerization models of protein aggregation

Report a bug (only for logged in users!)Click here to report a bug for this page (MaRDI item Q2343704)