Empirical Bayes analysis of unreplicated microarray data

DOI10.1007/S00180-008-0133-9MaRDI QIDQ964653zbMATH OpenOpenAlexFDO

Authors B. E. Eshmatov

Publication date 22 April 2010

Published in Computational Statistics (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1007/s00180-008-0133-9

zbMATH Keywords

heterogeneous errorMarkov chain Monte-CarloMCMCtwo-way ANOVA

Mathematics Subject Classification ID

Empirical decision procedures; empirical Bayes procedures (62C12) Analysis of variance and covariance (ANOVA) (62J10) Applications of statistics to biology and medical sciences; meta analysis (62P10) Numerical analysis or methods applied to Markov chains (65C40) Biochemistry, molecular biology (92C40)

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Cites work

• Bayesian Models for Gene Expression With DNA Microarray Data
• Detecting Differentially Expressed Genes in Microarrays Using Bayesian Model Selection
• Empirical Bayes Analysis of a Microarray Experiment
• scientific article; zbMATH DE number 774836 (Why is no real title available?)
• Importance of replication in microarray gene expression studies: Statistical methods and evidence from repetitive cDNA hybridizations
• Practical Markov Chain Monte Carlo
• Robbins, empirical Bayes and microarrays
• Significance analysis of microarrays applied to the ionizing radiation response

Cited in

(14)

• An empirical Bayes' approach to joint analysis of multiple microarray gene expression studies
• A bootstrap-based non-parametric ANOVA method with applications to factorial microarray data
• Empirical Bayes Analysis of a Microarray Experiment
• scientific article; zbMATH DE number 1750180 (Why is no real title available?)
• scientific article; zbMATH DE number 1750188 (Why is no real title available?)
• Empirical and fully Bayesian approaches for random effects models in microarray data analysis
• An automatic thresholding approach to gene expression analysis
• Empirical Bayes Microarray ANOVA and Grouping Cell Lines by Equal Expression Levels
• Incorporating Biological Information as a Prior in an Empirical Bayes Approach to Analyzing Microarray Data
• Statistical analysis of microarray data: a Bayesian approach
• Empirical Bayes methods for DNA microarray data
• Rejoinder: ``Microarrays, empirical Bayes and the two-groups model
• Laplace approximated EM microarray analysis: an empirical Bayes approach for comparative microarray experiments
• A heavy-tailed empirical Bayes method for replicated microarray data

Describes a project that uses

Uses Software

• EBarrays

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