Geometric methods for protein structure comparison

DOI10.1007/978-3-540-44827-3_3MaRDI QIDQ3158112zbMATH OpenFDO

Authors Carlo Ferrari, Concettina Guerra

Publication date 20 January 2005

Published in Lecture Notes in Computer Science (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1007/978-3-540-44827-3_3

Mathematics Subject Classification ID

Computer graphics; computational geometry (digital and algorithmic aspects) (68U05) Biochemistry, molecular biology (92C40)

Recommendations

• Protein structure comparison: algorithms and applications
• SimDiv: A New Solution for Protein Comparison
• Comparing 3-D protein structure similarity by using geometric invariants
• A comparison of methods for assessing the structural similarity of proteins
• A differential geometric treatment of protein structure comparison

Cited in

(23)

• A differential geometric treatment of protein structure comparison
• Protein classification by matching and clustering surface graphs
• Geometric models for secondary structures in proteins
• Protein structure comparison: algorithms and applications
• Spatial pattern detection in structural bioinformatics
• Identifying flat regions and slabs in protein structures
• A comparison of methods for assessing the structural similarity of proteins
• Geometric suffix tree: indexing protein 3-D structures
• Comparing 3-D protein structure similarity by using geometric invariants
• A Statistical Method for Comparison of Two Structures and Its Biological Applications
• Solving a generalized distance geometry problem for protein structure determination
• Finding the consensus shape for a protein family
• Effective rigid body search using generalized 5D Fourier transform
• scientific article; zbMATH DE number 223921 (Why is no real title available?)
• Invariant features for searching in protein fold databases
• Geometric Suffix Tree: A New Index Structure for Protein 3-D Structures
• Combinatorial Pattern Matching
• scientific article; zbMATH DE number 5209808 (Why is no real title available?)
• On protein structure alignment under distance constraint
• scientific article; zbMATH DE number 2242470 (Why is no real title available?)
• RMSD calculations for comparing protein three-dimensional structures
• Recognition of structure similarities in proteins
• An algorithmic approach to the identification of rigid domains in proteins

This page was built for publication: Geometric methods for protein structure comparison

Report a bug (only for logged in users!)Click here to report a bug for this page (MaRDI item Q3158112)