Prediction of Carbohydrate-Binding Proteins from Sequences Using Support Vector Machines

DOI10.1155/2010/289301MaRDI QIDQ3002736zbMATH OpenOpenAlexWikidataFDO

Authors Seizi Someya, Masanori Kakuta, Mizuki Morita, Kazuya Sumikoshi, Wei Cao, Zhenyi Ge, Osamu Hirose, Shugo Nakamura, Tohru Terada, Kentaro Shimizu

Publication date 24 May 2011

Published in Advances in Bioinformatics (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1155/2010/289301

Mathematics Subject Classification ID

Learning and adaptive systems in artificial intelligence (68T05) Computational methods for problems pertaining to biology (92-08) Biochemistry, molecular biology (92C40)

Recommendations

• Predicting \(O\)-glycosylation sites in mammalian proteins by using SVMs
• Sequence-based protein-protein interaction prediction via support vector machine
• Support vector machines for prediction of protein domain structural class

Cited in

(6)

• Support vector machines for learning to identify the critical positions of a protein
• Ligand-binding prediction in the resistance-nodulation-cell division (RND) proteins
• Prediction of \(N\)-linked glycan branching patterns using artificial neural networks
• On using physico-chemical properties of amino acids in string kernels for protein classification via support vector machines
• Carbohydrate-protein interactions: advances and challenges
• Population-based incremental learning for the prediction of Homo sapiens' protein secondary structure

Describes a project that uses

Uses Software

• ClustalW
• UniProt
• PSI-BLAST
• BLAST

This page was built for publication: Prediction of Carbohydrate-Binding Proteins from Sequences Using Support Vector Machines

Report a bug (only for logged in users!)Click here to report a bug for this page (MaRDI item Q3002736)