Stochastic modelling of the eukaryotic heat shock response

DOI10.1016/j.jtbi.2010.04.029zbMath1461.92024OpenAlexW2017657395WikidataQ84149542 ScholiaQ84149542MaRDI QIDQ1720104

Barbara Gambin, Andrzej Mizera

Publication date: 12 February 2019

Published in: Journal of Theoretical Biology (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.jtbi.2010.04.029

zbMATH Keywords

Markov chainstationary distributioncomputer simulationsstochastic modelGillespie algorithm

Mathematics Subject Classification ID

Applications of Markov chains and discrete-time Markov processes on general state spaces (social mobility, learning theory, industrial processes, etc.) (60J20) Cell biology (92C37)

Related Items

Mathematical modeling and analysis of the heat shock protein response during thermal stress in fish and HeLa cells, Biologically sound formal model of Hsp70 heat induction

Uses Software

• R
• AUTO
• AUTO-86
• MCQueue
• XPPAUT
• COPASI
• clusfind

Cites Work

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• Discrete-time stochastic modeling and simulation of biochemical networks
• Mathematical modeling of heat shock protein synthesis in response to temperature change
• Stochastic effects and bistability in T cell receptor signaling
• Simulating, Analyzing, and Animating Dynamical Systems
• Computational Heuristics for Simplifying a Biological Model
• Finding Groups in Data
• Improved Bounds for Mixing Rates of Markov Chains and Multicommodity Flow
• Markov Chains