General selection models: Bernstein duality and minimal ancestral structures
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Abstract: -Wright--Fisher processes provide a robust framework to describe the type-frequency evolution of an infinite neutral population. We add a polynomial drift to the corresponding stochastic differential equation to incorporate frequency-dependent selection. A decomposition of the drift allows us to approximate the solution of the stochastic differential equation by a sequence of Moran models. The genealogical structure underlying the Moran model leads in the large population limit to a generalisation of the ancestral selection graph of Krone and Neuhauser. Building on this object, we construct a continuous-time Markov chain and relate it to the forward process via a new form of duality, which we call Bernstein duality. We adapt classical methods based on the moment duality to determine the time to absorption and criteria for the accessibility of the boundaries; this extends a recent result by Gonz'alez Casanova and Span`o. An intriguing feature of the construction is that the same forward process is compatible with multiple backward models. In this context we introduce suitable notions for minimality among the ancestral processes and characterise the corresponding parameter sets. In this way we recover classic ancestral structures as minimal ones.
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Cites work
- scientific article; zbMATH DE number 3951715 (Why is no real title available?)
- scientific article; zbMATH DE number 1032051 (Why is no real title available?)
- A classification of coalescent processes for haploid exchangeable population models
- A coalescent dual process for a Wright-Fisher diffusion with recombination and its application to haplotype partitioning
- A coalescent dual process in a Moran model with genic selection
- A coalescent dual process in a Moran model with genic selection, and the lambda coalescent limit
- A probabilistic view on the deterministic mutation-selection equation: dynamics, equilibria, and ancestry via individual lines of descent
- A sample path proof of the duality for stochastically monotone Markov processes
- A transition function expansion for a diffusion model with selection.
- Ancestral processes with selection
- Branching Brownian motion and selection in the spatial \(\Lambda\)-Fleming-Viot process
- Branching Brownian motion, mean curvature flow and the motion of hybrid zones
- Coalescents with multiple collisions
- Conditions for exchangeable coalescents to come down from infinity
- Duality and fixation in \(\Xi\)-Wright-Fisher processes with frequency-dependent selection
- Equivalence of Stochastic Equations and Martingale Problems
- Erratum: ``The impact of selection in the \(\Lambda\) Wright-Fisher model
- Looking down in the ancestral selection graph: a probabilistic approach to the common ancestor type distribution
- Markov Chains
- Mathematical population genetics. I: Theoretical introduction.
- On Ruelle's probability cascades and an abstract cavity method
- On \(\Lambda\)-Fleming-Viot processes with general frequency-dependent selection
- On martingales and Feller semigroups
- On the block counting process and the fixation line of exchangeable coalescents
- On the notion(s) of duality for Markov processes
- On the stationary distribution of the block counting process for population models with mutation and selection
- Particle representations for measure-valued population models
- Recent progress in coalescent theory.
- Some mathematical models from population genetics. École d'Été de Probabilités de Saint-Flour XXXIX-2009
- Stochastic equations of non-negative processes with jumps
- Stochastic equations, flows and measure-valued processes
- Stochastic flows associated to coalescent processes
- Strong solutions of jump-type stochastic equations
- The \(\Lambda\)-lookdown model with selection
- The ancestral graph and gene genealogy under frequency-dependent selection
- The coalescent
- The common ancestor at a nonneutral locus
- The common ancestor process for a Wright-Fisher diffusion
- The common ancestor type distribution of a \(\Lambda\)-Wright-Fisher process with selection and mutation
- The equivalence of absorbing and reflecting barrier problems for stochastically monotone Markov processes
- The fixation line in the \(\Lambda\)-coalescent
- The general coalescent with asynchronous mergers of ancestral lines
- The impact of selection in the \(\Lambda\)-Wright-Fisher model
- The process of most recent common ancestors in an evolving coalescent
- The sequential loss of allelic diversity
- The size of the last merger and time reversal in \(\Lambda\)-coalescents
- The time to absorption in \(\Lambda\)-coalescents
- Total variation distances and rates of convergence for ancestral coalescent processes in exchangeable population models
- Yamada-Watanabe results for stochastic differential equations with jumps
Cited in
(7)- Quasi-equilibria and click times for a variant of Muller's ratchet
- Combinatorics of ancestral lines for a Wright-Fisher diffusion with selection in a Lévy environment
- Bernoulli factories and duality in Wright-Fisher and Allen-Cahn models of population genetics
- Lines of descent in a Moran model with frequency-dependent selection and mutation
- Moran models and Wright–Fisher diffusions with selection and mutation in a one-sided random environment
- Lines of descent in the deterministic mutation-selection model with pairwise interaction
- Duality and fixation in \(\Xi\)-Wright-Fisher processes with frequency-dependent selection
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