Boolean modeling of genetic regulatory networks
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Publication:3370795
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- Encoding Boolean networks into reaction systems for investigating causal dependencies in gene regulation
- Robustness and fragility of Boolean models for genetic regulatory networks
- Fixed points and connections between positive and negative cycles in Boolean networks
- Number of fixed points and disjoint cycles in monotone Boolean networks
- Boolean networks for modeling gene regulation
- Bistability and asynchrony in a Boolean model of the \textsc{L}-arabinose operon in \textit{Escherichia coli}
- Complexity of fixed point counting problems in Boolean networks
- A two-scale mathematical model for DNA transcription
- Zero, one and two-switch models of gene regulation
- Time-delayed models of gene regulatory networks
- The topology of the regulatory interactions predicts the expression pattern of the segment polarity genes in \textit{Drosophila melanogaster}
- A proposal for using the ensemble approach to understand genetic regulatory networks
- Modeling transport regulation in gene regulatory networks
- The transition from differential equations to Boolean networks: A case study in simplifying a regulatory network model
- Gene expression modeling through positive Boolean functions
- Boolean models of bistable biological systems
- Canalization and symmetry in Boolean models for genetic regulatory networks
- Boolean biology: introducing Boolean networks and finite dynamical systems models to biology and mathematics courses
- Boolean network analysis of a neurotransmitter signaling pathway
- Phenotype control of partially specified Boolean networks
- Encoding threshold Boolean networks into reaction systems for the analysis of gene regulatory networks
- Inferring the topology of gene regulatory networks: an algebraic approach to reverse engineering
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