Boolean modeling of genetic regulatory networks

zbMATH Open1079.92029MaRDI QIDQ3370795FDOQ3370795

Authors: Réka Albert 

Publication date: 8 February 2006

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zbMATH Keywords

gene mutationssegment polarity gene networks

Mathematics Subject Classification ID

Biochemistry, molecular biology (92C40) Circuits, networks (94C99) Neural networks for/in biological studies, artificial life and related topics (92B20)

Cited In (21)

• Model Checking Gene Regulatory Networks
• An adjustable aperiodic model class of genomic interactions using continuous time Boolean networks (Boolean delay equations)
• Formalizing and enriching phenotype signatures using Boolean networks
• Prioritization of candidate genes through Boolean networks
• State-based supervisory control with restrictions on the supervisor realization
• Continuous genetic networks
• Fixed points in conjunctive networks and maximal independent sets in graph contractions
• Fixed points and connections between positive and negative cycles in Boolean networks
• Boolean networks for modeling gene regulation
• Bistability and asynchrony in a Boolean model of the \textsc{L}-arabinose operon in \textit{Escherichia coli}
• Complexity of fixed point counting problems in Boolean networks
• Zero, one and two-switch models of gene regulation
• A two-scale mathematical model for DNA transcription
• Time-delayed models of gene regulatory networks
• The transition from differential equations to Boolean networks: A case study in simplifying a regulatory network model
• Gene expression modeling through positive Boolean functions
• Canalization and symmetry in Boolean models for genetic regulatory networks
• Boolean models of bistable biological systems
• Boolean biology: introducing Boolean networks and finite dynamical systems models to biology and mathematics courses
• Phenotype control of partially specified Boolean networks
• Number of Fixed Points and Disjoint Cycles in Monotone Boolean Networks

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