Adaptive linear step-up procedures that control the false discovery rate

DOI10.1093/BIOMET/93.3.491zbMATH Open1108.62069OpenAlexW1980361506WikidataQ30051849 ScholiaQ30051849MaRDI QIDQ3434072FDOQ3434072

Authors: Yoav Benjamini, Abba M. Krieger, Daniel Yekutieli 

Publication date: 23 April 2007

Published in: Biometrika (Search for Journal in Brave)

Full work available at URL: https://semanticscholar.org/paper/715580a7be4c1945b2ab608bd43dd4f718587643

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zbMATH Keywords

Multiple testingTwo-stage procedureFalse discovery rate

Mathematics Subject Classification ID

Applications of statistics to biology and medical sciences; meta analysis (62P10) Paired and multiple comparisons; multiple testing (62J15)

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• Genome-wide significance levels and weighted hypothesis testing
• Bonferroni-type Plug-in Procedure Controlling Generalized Familywise Error Rate
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• A cross-validation based estimation of the proportion of true null hypotheses
• Control of the false discovery rate under dependence using the bootstrap and subsampling
• A review of modern multiple hypothesis testing, with particular attention to the false discovery proportion
• Testing the disjunction hypothesis using Voronoi diagrams with applications to genetics
• New multiple testing method under no dependency assumption, with application to multiple comparisons problem
• Internal validation inferences of significant genomic features in genome-wide screening
• A new user specific multiple testing method for business applications: the SiMaFlex procedure
• Generalized Augmentation to Control the False Discovery Exceedance in Multiple Testing
• M-regression, false discovery rates and outlier detection with application to genetic association studies
• Multiple testing with discrete data: proportion of true null hypotheses and two adaptive FDR procedures
• \(F\)-distribution calibrated empirical likelihood ratio tests for multiple hypothesis testing
• Powerful multiple testing of paired null hypotheses using a latent graph model
• Covariate Adaptive False Discovery Rate Control With Applications to Omics-Wide Multiple Testing
• Fast FSR Variable Selection with Applications to Clinical Trials
• A simple forward selection procedure based on false discovery rate control
• Optimal rates of convergence for estimating the null density and proportion of nonnull effects in large-scale multiple testing
• Optimal weighting for false discovery rate control
• On adaptive procedures controlling the familywise error rate
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• Adapting to unknown sparsity by controlling the false discovery rate
• Discovering findings that replicate from a primary study of high dimension to a follow-up study
• On a generalized false discovery rate
• Exact calculations for false discovery proportion with application to least favorable configura\-tions
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• Proportion of Non-Zero Normal Means: Universal Oracle Equivalences and Uniformly Consistent Estimators
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• Mutual fund performance: false discoveries, bias, and power
• Oracle and Adaptive Compound Decision Rules for False Discovery Rate Control
• Optimal rejection curves for exact false discovery rate control
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• Accurate error control in high‐dimensional association testing using conditional false discovery rates
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• On the false discovery proportion convergence under Gaussian equi-correlation
• New FDR bounds for discrete and heterogeneous tests
• Replicability analysis for genome-wide association studies
• New procedures controlling the false discovery proportion via Romano-Wolf's heuristic
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• Adaptive and Dynamic Adaptive Procedures for False Discovery Rate Control and Estimation
• Comment: ``Microarrays, empirical Bayes and the two-groups model
• Selective inference in complex research
• Evaluations of FDR-controlling procedures in multiple hypothesis testing
• An inequality for correlations in unidimensional monotone latent variable models for binary variables
• Positive false discovery proportions: intrinsic bounds and adaptive control
• False discovery rate envelopes
• FDR control with adaptive procedures and FDR monotonicity
• Discovering the False Discovery Rate
• A conservative estimator for the proportion of false nulls based on Dvoretzky, Kiefer and Wolfowitz inequality
• Asymptotic optimality of the Westfall-Young permutation procedure for multiple testing under dependence
• Comments on: Control of the false discovery rate under dependence using the bootstrap and subsampling
• Bayesian Subset Modeling for High-Dimensional Generalized Linear Models
• Balanced control of generalized error rates
• Two simple sufficient conditions for FDR control
• Dynamic adaptive multiple tests with finite sample FDR control
• False discovery and false nondiscovery rates in single-step multiple testing procedures
• FDR control for pairwise comparisons of normal means based on goodness of fit test
• On improving some adaptive BH procedures controlling the FDR under dependence
• AdaPT: an interactive procedure for multiple testing with side information
• An adaptive step-down procedure with proven FDR control under independence
• On the false discovery rate and an asymptotically optimal rejection curve
• Estimating the number of true null hypotheses in multiple hypothesis testing
• Comments on: Control of the false discovery rate under dependence using the bootstrap and subsampling
• A power analysis for Model-X knockoffs with \(\ell_p\)-regularized statistics
• Local false discovery rate estimation with competition-based procedures for variable selection
• On spike and slab empirical Bayes multiple testing
• Beliefs about public debt and the demand for government spending
• Adapting to one- and two-way classified structures of hypotheses while controlling the false discovery rate
• Measuring network systemic risk contributions: a leave-one-out approach
• Conditional calibration for false discovery rate control under dependence
• Common change-point estimation and changed panel isolation after sequential detection in an exponential family
• Variability and stability of the false discovery proportion
• Weighted \(p\)-value procedures for controlling FDR of grouped hypotheses
• Controlling mixed directional false discovery rate in multidimensional decisions with applications to microarray studies
• Adaptive novelty detection with false discovery rate guarantee
• Knockoff procedure for false discovery rate control in high-dimensional data streams
• Adaptive linear step-up multiple testing procedure with the bias-reduced estimator
• Controlling the FDR in imperfect matches to an incomplete database
• A unified treatment of multiple testing with prior knowledge using the p-filter
• Null-free false discovery rate control using decoy permutations
• Estimating the number of equal components for two high-dimensional mean vectors
• Dynamic adaptive procedures that control the false discovery rate
• FDR control under block dependence
• Comments on: Control of the false discovery rate under dependence using the bootstrap and subsampling
• Post-selection inference following aggregate level hypothesis testing in large-scale genomic data
• Analysis and modeling of time-variant amplitude-frequency couplings of and between oscillations of EEG bursts
• Empirical Bayes cumulative \(\ell\)-value multiple testing procedure for sparse sequences
• Multiple testing approaches for hypotheses in integrative genomics
• Constructing confidence intervals for selected parameters
• Phase-dependence of response curves to deep brain stimulation and their relationship: from essential tremor patient data to a Wilson-Cowan model
• A Two-Step Multiple Comparison Procedure for a Large Number of Tests and Multiple Treatments
• A hierarchical Bayesian approach to multiple testing in disease mapping
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• Testing for outliers with conformal p-values

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• SAM

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