Alignment Statistics for Long-Range Correlated Genomic Sequences

DOI10.1007/11732990_36MaRDI QIDQ3596291zbMATH OpenOpenAlexFDO

Authors Philipp W. Messer, Ralf Bundschuh, Martin Vingron, P. F. Arndt

Publication date 30 August 2007

Published in Lecture Notes in Computer Science (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1007/11732990_36

zbMATH Keywords

alignment scoresGaussian approximationlong-range correlations

Mathematics Subject Classification ID

General biostatistics (92B15) Genetics and epigenetics (92D10)

Recommendations

• Toward an accurate statistics of gapped alignments
• Understanding long-range correlations in DNA sequences
• Extreme value theory in some statistical analysis of genomic sequences
• Statistics of optimal sequence alignments.
• An accurate approximation to the distribution of the length of the longest matching word between two random DNA sequences

Cited in

(3)

• New powerful statistics for alignment-free sequence comparison under a pattern transfer model
• Algorithm for statistical alignment of two sequences derived from a Poisson sequence length distribution
• Long- and short-range correlations in genome organization

This page was built for publication: Alignment Statistics for Long-Range Correlated Genomic Sequences

Report a bug (only for logged in users!)Click here to report a bug for this page (MaRDI item Q3596291)