Epistasis and shapes of fitness landscapes

zbMATH Open1132.92017arXivq-bio/0603034MaRDI QIDQ5449201FDOQ5449201

Authors: Niko Beerenwinkel, Lior Pachter, Bernd Sturmfels 

Publication date: 11 March 2008

Full work available at URL: https://arxiv.org/abs/q-bio/0603034

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zbMATH Keywords

triangulationconvex polytopegenotype spacegene interactionshuman genotopepopulation simplex

Mathematics Subject Classification ID

Genetics and epigenetics (92D10) Three-dimensional polytopes (52B10) Polytopes and polyhedra (52B99)

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• Measuring epistasis in fitness landscapes: the correlation of fitness effects of mutations
• Occurrences of reciprocal sign epistasis in single- and multi-peaked theoretical fitness landscapes
• Toric dynamical systems
• Geometric, algebraic and topological combinatorics. Abstracts from the workshop held December 10--15, 2023
• On the evolution of epistasis. II: A generalized Wright-Kimura framework
• The geometry of partial fitness orders and an efficient method for detecting genetic interactions
• Cluster partitions and fitness landscapes of the Drosophila fly microbiome
• Toward the human genotope
• The influence of higher-order epistasis on biological fitness landscape topography
• Reciprocal sign epistasis is a necessary condition for multi-peaked fitness landscapes
• Title not available (Why is that?)
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• On the meaning of non-epistatic selection

Uses Software

• Macaulay2
• TOPCOM

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