Slow-scale tau-leaping method

DOI10.1016/J.CMA.2008.02.024MaRDI QIDQ995303zbMATH OpenOpenAlexWikidataFDO

Authors Yang Cao, Linda Petzold

Publication date 13 September 2010

Published in Computer Methods in Applied Mechanics and Engineering (Search for Journal in Brave)

Full work available at URL http://europepmc.org/articles/pmc2753989

zbMATH Keywords

stochastic simulation algorithmtau-leapingpartial equilibriumchemically reacting systemsdiscrete stochastic simulation

Mathematics Subject Classification ID

Chemically reacting flows (80A32) Chemical kinetics in thermodynamics and heat transfer (80A30)

Recommendations

• Tau leaping of stiff stochastic chemical systems via local central limit approximation
• Reversible-equivalent-monomolecular tau: a leaping method for ``small number and stiff stochastic chemical systems
• Stochastic projective methods for simulating stiff chemical reacting systems
• Nested stochastic simulation algorithms for chemical kinetic systems with multiple time scales
• \(S\)-leaping: an adaptive, accelerated stochastic simulation algorithm, bridging \(\tau\)-leaping and \(R\)-leaping

Cites work

• scientific article; zbMATH DE number 52118 (Why is no real title available?)
• scientific article; zbMATH DE number 2050734 (Why is no real title available?)
• scientific article; zbMATH DE number 852526 (Why is no real title available?)
• Consistency and Stability of Tau-Leaping Schemes for Chemical Reaction Systems
• Partial chemical equilibrium in fluid dynamics
• The Quasi-Steady-State Assumption: A Case Study in Perturbation
• The partial-equilibrium approximation in reacting flows

Cited in

(13)

• Tau leaping of stiff stochastic chemical systems via local central limit approximation
• Multiscale stochastic simulations of chemical reactions with regulated scale separation
• \(S\)-leaping: an adaptive, accelerated stochastic simulation algorithm, bridging \(\tau\)-leaping and \(R\)-leaping
• Time dependent solution for acceleration of tau-leaping
• Exploring the performance of spatial stochastic simulation algorithms
• Nested stochastic simulation algorithms for chemical kinetic systems with multiple time scales
• Reversible-equivalent-monomolecular tau: a leaping method for ``small number and stiff stochastic chemical systems
• Multilevel hybrid split-step implicit tau-leap
• Strong convergence and speed up of nested stochastic simulation algorithm
• Optimal explicit stabilized postprocessed \(\tau\)-leap method for the simulation of chemical kinetics
• Stochastic simulation of pattern formation in growing tissue: a multilevel approach
• Boosted hybrid method for solving chemical reaction systems with multiple scales in time and population size
• Slow-scale split-step tau-leap method for stiff stochastic chemical systems

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