FAMT

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Factor Analysis for Multiple Testing (FAMT) : Simultaneous Tests under Dependence in High-Dimensional Data

David Causeur

Last update: 9 May 2022

Copyright license: GNU General Public License, version 3.0, GNU General Public License, version 2.0

Software version identifier: 2.6

Official website: http://cran.r-project.org/web/packages/FAMT/index.html

Source code repository: https://github.com/cran/FAMT

Described by source

• A factor model approach to multiple testing under dependence

Cited In (63)

• sdafilter
• A statistical methodology to select covariates in high-dimensional data under dependence. Application to the classification of genetic profiles in oncology
• Estimating false discovery proportion under arbitrary covariance dependence
• Variational discriminant analysis with variable selection
• Automated and distributed statistical analysis of economic agent-based models
• On empirical distribution function of high-dimensional Gaussian vector components with an application to multiple testing
• Estimating minimum effect with outlier selection
• False discovery rate control with unknown null distribution: is it possible to mimic the oracle?
• armada
• Stability of feature selection in classification issues for high-dimensional correlated data
• Detecting weak signals in high dimensions
• A new perspective on robust \(M\)-estimation: finite sample theory and applications to dependence-adjusted multiple testing
• A testing based approach to the discovery of differentially correlated variable sets
• Estimation of the proportion of true null hypotheses in high-dimensional data under dependence
• False discovery rates for large-scale model checking under certain dependence
• Distributions associated with simultaneous multiple hypothesis testing
• Sparse factor model for co-expression networks with an application using prior biological knowledge
• Exact and asymptotic tests on a factor model in low and large dimensions with applications
• Robust high-dimensional factor models with applications to statistical machine learning
• Prediction regions through inverse regression
• SAM
• EDGE
• MAANOVA
• Pirlo
• leapp
• lpc
• RankGene
• BioWar
• ascrda
• FADA
• DCGL
• Mixed directional false discovery rate control in multiple pairwise comparisons using weighted \(p\)-values
• Robust inference via multiplier bootstrap
• xLLiM
• ASAP3
• DNA
• ERP
• BUScorrect
• Bolasso
• FarmTest
• Eigenstrat
• kerfdr
• VaDA
• Accounting for time dependence in large-scale multiple testing of event-related potential data
• New procedures controlling the false discovery proportion via Romano-Wolf's heuristic
• Unifying and generalizing methods for removing unwanted variation based on negative controls
• Predictor ranking and false discovery proportion control in high-dimensional regression
• Nonparametric estimation of functional dynamic factor model
• CLIFF
• sma
• BLINPLUS
• ruv
• F-test and z-test for high-dimensional regression models with a factor structure
• A general approach to account for dependence in large-scale multiple testing
• Cross-dimensional inference of dependent high-dimensional data
• Estimating false discovery proportion in multiple comparison under dependency
• Projected principal component analysis in factor models
• jointseg
• Control of the FWER in Multiple Testing Under Dependence
• Multiple hypothesis testing adjusted for latent variables, with an application to the AGEMAP gene expression data
• Integrating prior knowledge in multiple testing under dependence with applications to detecting differential DNA methylation
• The joint null criterion for multiple hypothesis tests
• Farmtest: factor-adjusted robust multiple testing with approximate false discovery control

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