Minimap2

swMATH28780MaRDI QIDQ40494FDOQ40494

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Source code repository: https://github.com/lh3/minimap2

Cited In (7)

• Lower density selection schemes via small universal hitting sets with short remaining path length
• \textit{De novo} clustering of long-read transcriptome data using a greedy, quality-value based algorithm
• Synteny paths for assembly graphs comparison
• DeepMinimizer: a differentiable framework for optimizing sequence-specific minimizer schemes
• Co-linear chaining with overlaps and gap costs
• Metagenomics binning of long reads using read-overlap graphs
• MetaCoAG: binning metagenomic contigs via composition, coverage and assembly graphs

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