swMATH30180MaRDI QIDQ41894FDOQ41894
scientific article; zbMATH DE number Author name (Why is no real title available?)
Official website: https://github.com/vgteam/vg#vg
Source code repository: https://github.com/vgteam/vg
(31)
- Eulertigs
- SPUMONI
- pufferfish2
- PuffAligner
- TwoPaCo
- Can formal languages help pangenomics to represent and analyze multiple genomes?
- MONI
- Walk-preserving transformation of overlapped sequence graphs into blunt sequence graphs with GetBlunted
- Indexing variation graphs
- BrownieAligner
- Mason
- Graphs cannot be indexed in polynomial time for sub-quadratic time string matching, unless SETH fails
- HISAT
- Minimap2
- Bowtie 2
- deBGA
- SplitMEM
- PALMapper
- openCypher
- LZ77
- BWA
- LoRDEC
- r-index
- Wheeler languages
- AStarix
- hybridSPAdes
- Vargas
- GraphAligner
- ART
- Linear time construction of indexable elastic founder graphs
- Fast and optimal sequence-to-graph alignment guided by seeds
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