A sparse conditional Gaussian graphical model for analysis of genetical genomics data

DOI10.1214/11-AOAS494zbMath1234.62151arXiv1202.6515OpenAlexW2018747370WikidataQ34384169 ScholiaQ34384169MaRDI QIDQ80801

Jianxin Yin, Hongzhe Li, Hongzhe Li, Jianxing Yin

Publication date: 1 December 2011

Published in: The Annals of Applied Statistics (Search for Journal in Brave)

Full work available at URL: https://arxiv.org/abs/1202.6515

zbMATH Keywords

regularizationgenetic networksseemingly unrelated regressioneQTL

Mathematics Subject Classification ID

Estimation in multivariate analysis (62H12) Applications of statistics to biology and medical sciences; meta analysis (62P10) Applications of graph theory (05C90) Monte Carlo methods (65C05) Biochemistry, molecular biology (92C40) Genetics and epigenetics (92D10)

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Uses Software

• glasso
• KEGG

Cites Work

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• A sparse conditional Gaussian graphical model for analysis of genetical genomics data
• Sparse inverse covariance estimation with the graphical lasso
• The Adaptive Lasso and Its Oracle Properties
• Causal graphical models in systems genetics: a unified framework for joint inference of causal network and genetic architecture for correlated phenotypes
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• High-dimensional graphs and variable selection with the Lasso
• Gradient directed regularization for sparse Gaussian concentration graphs, with applications to inference of genetic networks
• Partial Correlation Estimation by Joint Sparse Regression Models
• Tuning parameter selectors for the smoothly clipped absolute deviation method
• Statistical Methods for Expression Quantitative Trait Loci (eQTL) Mapping
• An Efficient Method of Estimating Seemingly Unrelated Regressions and Tests for Aggregation Bias

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