Chaos game representation of protein sequences based on the detailed HP model and their multifractal and correlation analyses

DOI10.1016/J.JTBI.2003.09.009zbMath1439.92148OpenAlexW2077715995WikidataQ52007252 ScholiaQ52007252MaRDI QIDQ2187487

Ka-Sing Lau, Zu-Guo Yu, V. V. Anh

Publication date: 3 June 2020

Published in: Journal of Theoretical Biology (Search for Journal in Brave)

Full work available at URL: https://eprints.qut.edu.au/413/1/CGRmanu.pdf

zbMATH Keywords

multifractal analysisphylogenetic treecorrelation analysischaos game representation of protein sequences

Mathematics Subject Classification ID

Applications of game theory (91A80) Protein sequences, DNA sequences (92D20) Fractals (28A80)

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Cites Work

• The infinite number of generalized dimensions of fractals and strange attractors
• Fractals related to long DNA sequences and complete genomes
• Dimensions of fractals related to languages defined by tagged strings in complete genomes
• Fractal measures and their singularities: The characterization of strange sets
• Multifractality in time series
• Avoided strings in bacterial complete genomes and a related combinatorial problem
• Distance, correlation and mutual information among portraits of organisms based on complete genomes
• Multifractal analysis of DNA sequences using a novel chaos-game representation

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