WGCNA

swMATH7123WikidataQ102537983CRANWGCNAMaRDI QIDQ19178

Weighted Correlation Network Analysis

No author found.

Last update: 7 December 2023

Copyright license: GNU General Public License, version 3.0, GNU General Public License, version 2.0

Software version identifier: 1.72-1, 0.92-3, 0.93, 0.94, 0.95, 0.96, 0.97, 0.98, 0.99, 1.00, 1.10-2, 1.11-1, 1.11-2, 1.11-3, 1.11, 1.12, 1.13, 1.14, 1.15, 1.17, 1.18-1, 1.18-2, 1.18, 1.19, 1.20, 1.22, 1.23-1, 1.25-1, 1.25-2, 1.25, 1.26, 1.27-1, 1.34, 1.41-1, 1.42, 1.43, 1.46, 1.47, 1.48, 1.49, 1.51, 1.60, 1.61, 1.62, 1.63, 1.64-1, 1.66, 1.67, 1.68, 1.69, 1.70-3, 1.71, 1.72-5

Source code repository: https://github.com/cran/WGCNA

Description

Functions necessary to perform Weighted Correlation Network Analysis on high-dimensional data as originally described in Horvath and Zhang (2005) <doi:10.2202/1544-6115.1128> and Langfelder and Horvath (2008) <doi:10.1186/1471-2105-9-559>. Includes functions for rudimentary data cleaning, construction of correlation networks, module identification, summarization, and relating of variables and modules to sample traits. Also includes a number of utility functions for data manipulation and visualization.

Cites work

• A General Framework for Weighted Gene Co-Expression Network Analysis
• WGCNA: an R package for weighted correlation network analysis

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