pcalg
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Pcalg
Description
Functions for causal structure learning and causal inference using graphical models. The main algorithms for causal structure learning are PC (for observational data without hidden variables), FCI and RFCI (for observational data with hidden variables), and GIES (for a mix of data from observational studies (i.e. observational data) and data from experiments involving interventions (i.e. interventional data) without hidden variables). For causal inference the IDA algorithm, the Generalized Backdoor Criterion (GBC), the Generalized Adjustment Criterion (GAC) and some related functions are implemented. Functions for incorporating background knowledge are provided.
Cited in
(only showing first 100 items - show all)- Estimating high-dimensional intervention effects from observational data
- causalDisco
- NetCoupler
- Testing conditional independence in supervised learning algorithms
- eff2
- cuPC
- phsl
- causal-learn
- BCDAG
- Penalized estimation of directed acyclic graphs from discrete data
- mDAG
- pcgen
- Structure learning in Bayesian networks using regular vines
- Faithfulness and learning hypergraphs from discrete distributions
- Learning causal graphs with latent confounders in weak faithfulness violations
- ggm
- Scalable multi-output label prediction: from classifier chains to classifier trellises
- Inferring large graphs using \(\ell_1\)-penalized likelihood
- deal
- gRc
- NETWORKINFERENCE
- GCCA
- Sparse permutation invariant covariance estimation
- Inferring sparse Gaussian graphical models with latent structure
- High dimensional sparse covariance estimation via directed acyclic graphs
- Adaptive estimation of covariance matrices via Cholesky decomposition
- HUGIN
- Causal inference in partially linear structural equation models
- High-dimensional consistency in score-based and hybrid structure learning
- catnet
- Rgraphviz
- bnlearn
- graph
- gRain
- huge
- Knowledge transfer for causal discovery
- Separoids
- Bayesian network structural learning from complex survey data: a resampling based approach
- A survey on causal discovery: theory and practice
- A local method for identifying causal relations under Markov equivalence
- Partitioned hybrid learning of Bayesian network structures
- Modelling an energy market with Bayesian networks for non-normal data
- Compatible priors for model selection of high-dimensional Gaussian DAGs
- rbmn
- PleioGRiP
- gRbase
- corpcor
- Treelets -- an adaptive multi-scale basis for sparse unordered data
- causaleffect
- Large-scale local causal inference of gene regulatory relationships
- Separators and adjustment sets in causal graphs: complete criteria and an algorithmic framework
- Improving Bayesian network local structure learning via data-driven symmetry correction methods
- Learning causal structure from mixed data with missing values using Gaussian copula models
- Estimation of positive definite M-matrices and structure learning for attractive Gaussian Markov random fields
- A generalized back-door criterion
- Causal statistical inference in high dimensions
- TETRAD
- Estimating bounds on causal effects in high-dimensional and possibly confounded systems
- reldist
- SynTReN
- TikzDevice
- Two optimal strategies for active learning of causal models from interventional data
- A uniformly consistent estimator of causal effects under the k-triangle-faithfulness assumption
- BDAGL
- D2C
- gRapHD
- BDgraph
- Fast causal orientation learning in directed acyclic graphs
- MXM
- DirectLiNGAM
- From dependency to causality: a machine learning approach
- Ultra-scalable and efficient methods for hybrid observational and experimental local causal pathway discovery
- Inferring gene regulatory networks by PCA-CMI using Hill climbing algorithm based on MIT score and SORDER method
- \(\mathsf{PenPC}\): a two-step approach to estimate the skeletons of high-dimensional directed acyclic graphs
- A Gibbs sampler for learning DAGs
- Estimating causal structure using conditional DAG models
- RHugin
- dagitty
- Objective Bayesian search of Gaussian directed acyclic graphical models for ordered variables with non-local priors
- Entropy inference and the James-Stein estimator, with application to nonlinear gene association networks
- scientific article; zbMATH DE number 5885097 (Why is no real title available?)
- Finding optimal Bayesian network given a super-structure
- Testing a single regression coefficient in high dimensional linear models
- Tigramite
- ParallelPC
- Estimating high-dimensional directed acyclic graphs with the PC-algorithm
- R/qtl
- sparsebn
- Copula grow-shrink algorithm for structural learning
- netgwas
- NESTOR
- GeneNetWeaver
- treatSens
- InvariantCausalPrediction
- CAM
- GADAG
- Geometry of the faithfulness assumption in causal inference
- \(\ell_{0}\)-penalized maximum likelihood for sparse directed acyclic graphs
- varrank
- NARROMI
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