Cited in
(75)- Distribution modeling and simulation of gene expression data
- Bioinformatics and computational biology solutions using R and Bioconductor.
- A computational approach inspired by simulated annealing to study the stability of protein interaction networks in cancer and neurological disorders
- Estimating a common covariance matrix for network meta-analysis of gene expression datasets in diffuse large B-cell lymphoma
- An empirical Bayes change-point model for transcriptome time-course data
- Microarray background correction: maximum likelihood estimation for the normal-exponential convolution
- Clinical Trial Data Analysis Using R and SAS, Second Edition
- Problems in gene clustering based on gene expression data
- Frozen robust multiarray analysis (fRMA)
- Accurate Ranking of Differentially Expressed Genes by a Distribution-Free Shrinkage Approach
- Discrimination and scoring using small sets of genes for two-sample microarray data
- A flexible approximate likelihood ratio test for detecting differential expression in microarray data
- Bioconductor
- Algorithm 611
- beadarray
- gcrma
- oligo
- vsn
- Simpleaffy
- CGH-Plotter
- mathStatica
- multtest
- affypdnn
- affycomp
- affyPLM
- hopach
- limma
- RUVseq
- SIMAGE
- QSARdata
- affyPara
- arrayQualityMetrics
- idr
- IsoGene
- gRapHD
- Affycomp III
- breastCancerVDX
- Hot
- GEOquery
- AICcmodavg
- jpeg
- Puma
- g Profiler
- ChIPOTle
- FastAnnotator
- MISSEL
- Transcriptator
- GMCM
- CorrT
- correlateR
- HIPPIE
- ArrayExpress
- GEST
- ACE-it
- panp
- fRMA
- spkTools
- aroma.affymetrix
- MADS
- marray
- sma
- HPMIXED
- seeker
- Enhanced Quantile Normalization of Microarray Data to Reduce Loss of Information in Gene Expression Profiles
- A permutation test motivated by microarray data analysis
- BGX: a fully Bayesian integrated approach to the analysis of Affymetrix GeneChip data
- In defense of the indefensible: a very naïve approach to high-dimensional inference
- Bayesian factor models for the detection of coherent patterns in gene expression data
- Network-based sparse Bayesian classification
- A mixed integer programming-based global optimization framework for analyzing gene expression data
- Empirical study for the agreement between statistical methods in quality assessment and control of microarray data
- Model simplification for supervised classification of metabolic networks
- Multiclass classification of sarcomas using pathway based feature selection method
- A novel individualized drug repositioning approach for predicting personalized candidate drugs for type 1 diabetes mellitus
- Statistical analysis of next generation sequencing data
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