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r-index

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R-index
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swMATH34743MaRDI QIDQ46452FDOQ46452


Author name not available (Why is that?)

Official website: https://github.com/alshai/r-index

Source code repository: https://github.com/alshai/r-index



Described by source

  • Efficient construction of a complete index for pan-genomics read alignment
  • Unnamed Publication


Cited In (43)

  • Eulertigs
  • HumGut
  • SPUMONI
  • pufferfish2
  • PuffAligner
  • TwoPaCo
  • MONI
  • Wheeler languages
  • Comparison of LZ77-type parsings
  • Title not available (Why is that?)
  • Online LZ77 parsing and matching statistics with RLBWTs
  • A separation between RLSLPs and LZ77
  • Document listing on repetitive collections with guaranteed performance
  • Computing the original eBWT faster, simpler, and with less memory
  • Grammar index by induced suffix sorting
  • r-indexing the eBWT
  • Lempel-Ziv-like parsing in small space
  • Refining the \(r\)-index
  • Soap
  • Wumpus
  • VCFtools
  • PATRICIA
  • KMC
  • siEDM
  • Minimap2
  • Bowtie 2
  • vg
  • dbwt
  • DYNAMIC
  • get-git-revisions
  • LZ77
  • BWA
  • Big-BWT
  • FRESCO
  • Brotli
  • libdivsufsort
  • Zstandard
  • tbwt
  • A compressed dynamic self-index for highly repetitive text collections
  • Improved characters distance sampling for online and offline text searching
  • A faster implementation of online RLBWT and its application to LZ77 parsing
  • A combinatorial view on string attractors
  • Universal compressed text indexing


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