Cited in
(35)- Estimating sequence similarity from read sets for clustering next-generation sequencing data
- Global optimization for scaffolding and completing genome assemblies
- Detection of outlying proportions
- confreq
- GRASS
- ABySS
- Meta-IDBA
- SSAKE
- Velvet
- BFAST
- CLARK
- BESST
- ScaffMatch
- alphaOutlier
- Mash
- Bowtie 2
- vg
- PALMapper
- TIPP
- BWA
- GASSST
- Kraken
- Chromatyping: Reconstructing Nucleosome Profiles from NOMe Sequencing Data
- Fast and optimal sequence-to-graph alignment guided by seeds
- MetaPhlAn
- CONSULT-II
- MetaPhyler
- Mason
- ChromaClique
- AStarix
- hybridSPAdes
- Vargas
- \textsc{AStarix}: fast and optimal sequence-to-graph alignment
- BrownieAligner
- CUSHAW suite: parallel and efficient algorithms for NGS read alignment
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