A Bayesian Mixture Model for Differential Gene Expression
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- scientific article; zbMATH DE number 5721727
Cites work
- A Direct Approach to False Discovery Rates
- A Statistical Framework for Expression-Based Molecular Classification in Cancer
- Bayesian Nonparametric Inference for Random Distributions and Related Functions
- Detecting differential gene expression with a semiparametric hierarchical mixture method
- Efficient MCMC schemes for robust model extensions using encompassing Dirichlet process mixture models
- Empirical Bayes Analysis of a Microarray Experiment
- Operating Characteristics and Extensions of the False Discovery Rate Procedure
- Rao-Blackwellisation of sampling schemes
- Significance analysis of microarrays applied to the ionizing radiation response
Cited in
(66)- A deconvolution path for mixtures
- Bayesian nonparametric multiple testing
- More nonparametric Bayesian inference in applications
- Empirical Bayesian approach to testing multiple hypotheses with separate priors for left and right alternatives
- A Bayesian nonparametric spiked process prior for dynamic model selection
- BOPA: A Bayesian hierarchical model for outlier expression detection
- Identifying atypically expressed chromosome regions using RNA-Seq data
- A compositional model to assess expression changes from single-cell RNA-seq data
- Unsupervised empirical Bayesian multiple testing with external covariates
- Bayesian hidden Markov models for dependent large-scale multiple testing
- Good, great, or lucky? Screening for firms with sustained superior performance using heavy-tailed priors
- Size, power and false discovery rates
- Model selection for maternal hypertensive disorders with symmetric hierarchical Dirichlet processes
- Fully Bayesian mixture model for differential gene expression: simulations and model checks
- Semi-parametric differential expression analysis via partial mixture estimation
- Rubbery Pólya tree
- Bayesian analysis of multiple hypothesis testing with applications to microarray experiments
- A Bayesian Model for Cross-Study Differential Gene Expression
- Finding causative genes from high-dimensional data: an appraisal of statistical and machine learning approaches
- A Bayesian decision procedure for testing multiple hypotheses in DNA microarray experiments
- scientific article; zbMATH DE number 5347341 (Why is no real title available?)
- Statistical analysis of C‐DNA microarray data for sample clustering and gene identification
- Bayesian Semiparametric Multiple Shrinkage
- A Bayesian nonparametric mixture model for selecting genes and gene subnetworks
- A Bernstein-type estimator for decreasing density with application to p-value adjustments
- False Discovery Rate Smoothing
- Binary classification with pFDR-pFNR losses
- Exploiting blank spots for model-based background correction in discovering genes with DNA array data
- Some issues in nonparametric Bayesian modeling using species sampling models
- A Bayesian extension of the hypergeometric test for functional enrichment analysis
- A semi-parametric Bayesian approach for detection of gene expression heterosis with RNA-seq data
- Identifying Differentially Expressed Genes in Meta-Analysis via Bayesian Model-Based Clustering
- Hierarchical Bayesian meta-analysis models for cross-platform microarray studies
- Bayesian–frequentist hybrid model with application to the analysis of gene copy number changes
- Bayesian modeling of MPSS data: gene expression analysis of bovine \textit{salmonella} infection
- Multiple testing using the posterior probabilities of directional alternatives, with application to genomic studies
- Estimating the False Discovery Rate Using Nonparametric Deconvolution
- Tail Posterior Probability for Inference in Pairwise and Multiclass Gene Expression Data
- A Bayesian approach to assessing differential expression of microarray data
- Bayesian Modeling of Differential Gene Expression
- BGX: a fully Bayesian integrated approach to the analysis of Affymetrix GeneChip data
- Hierarchical Inverse Gaussian Models and Multiple Testing: Application to Gene Expression Data
- Detecting differential gene expression with a semiparametric hierarchical mixture method
- A Bayesian hierarchical framework for modeling brain connectivity for neuroimaging data
- Bayesian functional enrichment analysis for the Reactome database
- Bayes and empirical-Bayes multiplicity adjustment in the variable-selection problem
- Two‐group Poisson‐Dirichlet mixtures for multiple testing
- Bayesian Nonparametric Panel Markov-Switching GARCH Models
- Asymptotic Bayes-optimality under sparsity of some multiple testing procedures
- A hierarchical Bayesian approach to record linkage and population size problems
- Local false discovery rate estimation with competition-based procedures for variable selection
- Feature selection and classification over the network with missing node observations
- A dynamic latent-space model for asset clustering
- Bayesian nonparametric variable selection as an exploratory tool for discovering differentially expressed genes
- High-dimensional Bayesian semiparametric models for small samples: a principled approach to the analysis of cytokine expression data
- Bayesian flexible models for ANOVA-type data
- Improved variational Bayes inference for transcript expression estimation
- On-line changepoint detection and parameter estimation with application to genomic data
- A Bayesian goodness-of-fit test for regression
- Microarrays, empirical Bayes and the two-groups model
- A semi-parametric Bayesian approach for differential expression analysis of RNA-seq data
- Simultaneous Bayesian analysis of contingency tables in genetic association studies
- Laplace approximated EM microarray analysis: an empirical Bayes approach for comparative microarray experiments
- A heavy-tailed empirical Bayes method for replicated microarray data
- A mixture model approach for the analysis of small exploratory microarray experiments
- Nonparametric Bayesian multiple testing for longitudinal performance stratification
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