Slice sampling. (With discussions and rejoinder)
From MaRDI portal
Publication:1412362
DOI10.1214/aos/1056562461zbMath1051.65007OpenAlexW32980360WikidataQ29040251 ScholiaQ29040251MaRDI QIDQ1412362
Publication date: 10 November 2003
Published in: The Annals of Statistics (Search for Journal in Brave)
Full work available at URL: https://doi.org/10.1214/aos/1056562461
Markov chain Monte Carlo methodadaptive methodsMetropolis algorithmGibbs samplingslice samplingoverrelaxationdynamical methodsreflective slice sampling
Sampling theory, sample surveys (62D05) Monte Carlo methods (65C05) Numerical analysis or methods applied to Markov chains (65C40)
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Cites Work
- Unnamed Item
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- Unnamed Item
- Reversible jump Markov chain Monte Carlo computation and Bayesian model determination
- An interruptible algorithm for perfect sampling via Markov chains
- An improved acceptance procedure for the hybrid Monte Carlo algorithm
- On Metropolis-Hastings algorithms with delayed rejection
- Analysis of a nonreversible Markov chain sampler.
- Bayesian learning for neural networks
- Perfect Slice Samplers
- Markov Chains and De-initializing Processes
- Delayed rejection in reversible jump Metropolis-Hastings
- Direction Choice for Accelerated Convergence in Hit-and-Run Sampling
- The polar slice sampler
- Optimum Monte-Carlo sampling using Markov chains
- Improving Stochastic Relaxation for Gussian Random Fields
- Sampling-Based Approaches to Calculating Marginal Densities
- Gibbs Sampling for Bayesian Non-Conjugate and Hierarchical Models by Using Auxiliary Variables
- Convergence of Slice Sampler Markov Chains
- Reparameterizing the generalized linear model to accelerate gibbs sampler convergence
- Adaptive Rejection Metropolis Sampling within Gibbs Sampling
- Efficiency and Convergence Properties of Slice Samplers
- A general limitation on Monte Carlo algorithms of the Metropolis type
- Rates of convergence of stochastically monotone and continuous time Markov models
- Perfect simulation using dominating processes on ordered spaces, with application to locally stable point processes
- Perfect Samplers for Mixtures of Distributions
- Adaptive Rejection Sampling for Gibbs Sampling
- Annealing Markov Chain Monte Carlo with Applications to Ancestral Inference
- Exact sampling with coupled Markov chains and applications to statistical mechanics
- How to couple from the past using a read-once source of randomness
- Learning the parts of objects by non-negative matrix factorization
- Monte Carlo sampling methods using Markov chains and their applications