Biomolecular topology: modelling and analysis
Biochemistry, molecular biology (92C40) Protein sequences, DNA sequences (92D20) Persistent homology and applications, topological data analysis (55N31) Research exposition (monographs, survey articles) pertaining to biology (92-02) Molecular structure (graph-theoretic methods, methods of differential topology, etc.) (92E10) Research exposition (monographs, survey articles) pertaining to algebraic topology (55-02) Research exposition (monographs, survey articles) pertaining to manifolds and cell complexes (57-02) Topological data analysis (62R40) Relations of manifolds and cell complexes with biology (57Z10)
- Persistent topology of protein space
- Atom-specific persistent homology and its application to protein flexibility analysis
- Topological model for recombination of DNA and RNA
- Topology and geometry of biopolymers. AMS special session on topology of biopolymers, Northeastern University, Boston, MA, USA, April 21--22, 2018
- scientific article; zbMATH DE number 770083
- scientific article; zbMATH DE number 5506200 (Why is no real title available?)
- scientific article; zbMATH DE number 4102053 (Why is no real title available?)
- scientific article; zbMATH DE number 3782042 (Why is no real title available?)
- scientific article; zbMATH DE number 1179517 (Why is no real title available?)
- scientific article; zbMATH DE number 1953220 (Why is no real title available?)
- scientific article; zbMATH DE number 964896 (Why is no real title available?)
- A Generalization of the Schur Complement by Means of the Moore–Penrose Inverse
- A calculus for rational tangles: applications to DNA recombination
- A note on the Hodge star operator
- A statistical approach to persistent homology
- A tiling approach to virus capsid assembly explaining a structural puzzle in virology
- A topological approach for protein classification
- Algebraic geometry over the complex numbers
- Alignment-free comparison of genome sequences by a new numerical characterization
- Barcodes: The persistent topology of data
- CHARMM
- Clique topology reveals intrinsic geometric structure in neural correlations
- Cohomology of digraphs and (undirected) graphs
- Computational topology. An introduction
- Computing multidimensional persistence
- Computing persistent homology
- Distributed computation of persistent homology
- Geometric pattern matching under Euclidean motion
- HERMES: persistent spectral graph software
- Higher dimensional discrete Cheeger inequalities
- Hodge Laplacians on graphs
- Hodge theory of SKT manifolds
- Hodge-theory and algebraic cycles
- Homological connectivity of random k -dimensional complexes
- Homologies of digraphs and Künneth formulas
- Homotopy continuation for the spectra of persistent Laplacians
- Kron Reduction of Graphs With Applications to Electrical Networks
- Local homology transfer and stratification learning
- Mathematical virology: a novel approach to the structure and assembly of viruses
- Morse theory for filtrations and efficient computation of persistent homology
- Nanotechnology: science and computation. Dedicated to Nadrian C. Seeman on the occasion of his 60th birthday.
- On a cohomology of digraphs and Hochschild cohomology
- On the path homology theory of digraphs and Eilenberg-Steenrod axioms
- Open Babel
- PERSISTENCE BARCODES FOR SHAPES
- PHAT -- persistent homology algorithms toolbox
- Path complexes and their homologies
- Persistence images: a stable vector representation of persistent homology
- Simplicial homotopy theory
- Simplicial networks and effective resistance
- Statistical topological data analysis using persistence landscapes
- The Hodge theory of algebraic maps
- The de Rham-Hodge analysis and modeling of biomolecules
- The persistence space in multidimensional persistent homology
- The theory of multidimensional persistence
- Topological persistence and simplification
- Topology and data
- Toward a spectral theory of cellular sheaves
- Viral genome phylogeny based on Lempel-Ziv complexity and Hausdorff distance
- jHoles: a tool for understanding biological complex networks via clique weight rank persistent homology
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