scientific article; zbMATH DE number 3943611
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(67)- Statistical analysis of hominoid molecular evolution
- Stochastic models for heterogeneous DNA sequences
- Classification of molecular sequence data using Bayesian phylogenetic mixture models
- Towards optimal distance functions for stochastic substitution models
- A stochastic evolution model for residue insertion-deletion independent from substitution
- Embeddability of Kimura 3ST Markov matrices
- A neutral evolution test derived from a theoretical amino acid substitution model
- Lie-Markov models derived from finite semigroups
- An evolution model for sequence length based on residue insertion-deletion independent of substitution: an application to the GC content in bacterial genomes
- Improved variance estimators for one- and two-parameter models of nucleotide substitution
- Modeling the evolution of the human mitochondrial genome
- Algorithm for statistical alignment of two sequences derived from a Poisson sequence length distribution
- Modeling nucleotide evolution: A heterogeneous rate analysis
- Generating Markov evolutionary matrices for a given branch length
- An approximate stationary solution for multi-allele neutral diffusion with low mutation rates
- Rate matrix estimation from site frequency data
- Scalable and accurate phylogenetic placement using pplacer-XR
- Incorporating compositional heterogeneity into Lie Markov models for phylogenetic inference
- Phylogenetic analysis of DNA sequences based on fractional Fourier transform
- Tropical geometric variation of tree shapes
- The impracticalities of multiplicatively-closed codon models: a retreat to linear alternatives
- An extended model for phylogenetic maximum likelihood based on discrete morphological characters
- Mathematical properties of some measures of evolutionary distance
- Geometric ergodicity of a Metropolis-Hastings algorithm for Bayesian inference of phylogenetic branch lengths
- Genetic composition of an exponentially growing cell population
- Efficient Bayesian inference of general Gaussian models on large phylogenetic trees
- Lie Markov models with purine/pyrimidine symmetry
- Consistency and identifiability of the polymorphism-aware phylogenetic models
- Evolutionary distances corrected for purifying selection and ancestral polymorphisms
- Multilocus phylogenetic analysis with gene tree clustering
- An alternative derivation of the stationary distribution of the multivariate neutral Wright-Fisher model for low mutation rates with a view to mutation rate estimation from site frequency data
- Identifiability of the unrooted species tree topology under the coalescent model with time-reversible substitution processes, site-specific rate variation, and invariable sites
- Is the protein model assignment problem under linked branch lengths NP-hard?
- A tutorial on the balanced minimum evolution problem
- Flow of information during an evolutionary process: the case of influenza A viruses
- Investigating the performance of AIC in selecting phylogenetic models
- Matrix group structure and Markov invariants in the strand symmetric phylogenetic substitution model
- Non-parametric application on nucleotide substitution in DNA sequences
- Reversible polymorphism-aware phylogenetic models and their application to tree inference
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- Expected frequencies of DNA patterns using whittle's formula
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- Large-Scale Multiple Sequence Alignment and Phylogeny Estimation
- Statistical inference for DNA sequences of promoters: a non-stationary qualitative model
- Pseudo-Reverse Approach in Genetic Evolution
- On the simulation of molecular evolutionary processes: considerations on the derivation and the confirmation of an estimator for the variance of nucleotide divergence estimated from restriction fragments
- Systematics and symmetry in molecular phylogenetic modelling: perspectives from physics
- Inferring Phenotypic Trait Evolution on Large Trees With Many Incomplete Measurements
- On the dispersion index of a Markovian molecular clock
- Prior density learning in variational Bayesian phylogenetic parameters inference
- When can we reconstruct the ancestral state? A unified theory
- Uniformization Stable Markov Models and Their Jordan Algebraic Structure
- Advancing divide-and-conquer phylogeny estimation using Robinson-Foulds supertrees
- A novel algebraic approach to time-reversible evolutionary models
- A phylogenetic approach to genomic language modeling
- Speeding up inference of homologous recombination in bacteria
- Bayesian inference of phylogenetic distances: revisiting the eigenvalue approach
- On Gibbs Sampling for Endpoint-Conditioned Neighbor-Dependent Sequence Evolution Models
- Hypothesis tests for phylogenetic quartets, with applications to coalescent-based species tree inference
- Necessary conditions for the method of inferring phylogeny by linear invariants
- Generation of the exact distribution and simulation of matched nucleotide sequences on a phylogenetic tree
- Distribution of distances between topologies and its effect on detection of phylogenetic recombination
- The exact distribution of divergence times
- Logarithmic bounds on the posterior divergence time of two sequences
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