Reversible polymorphism-aware phylogenetic models and their application to tree inference
DOI10.1016/J.JTBI.2016.07.042zbMATH Open1344.92117OpenAlexW2952596786WikidataQ39536709 ScholiaQ39536709MaRDI QIDQ309245FDOQ309245
Authors: Dominik Schrempf, Bui Quang Minh, Nicola De Maio, Arndt von Haeseler, Carolin Kosiol 
Publication date: 7 September 2016
Published in: Journal of Theoretical Biology (Search for Journal in Brave)
Full work available at URL: https://doi.org/10.1016/j.jtbi.2016.07.042
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phylogeneticsincomplete lineage sortingreversible polymorphism-aware phylogenetic modelspecies treesubstitution model
Applications of Markov chains and discrete-time Markov processes on general state spaces (social mobility, learning theory, industrial processes, etc.) (60J20) Genetics and epigenetics (92D10) Problems related to evolution (92D15)
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- On the number of segregating sites in genetical models without recombination
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- The allele-frequency spectrum in a decoupled Moran model with mutation, drift, and directional selection, assuming small mutation rates
- Diffusion models in population genetics
- The Differential Equation of the Distribution of Gene Frequencies
- Line-of-descent and genealogical processes, and their applications in population genetics models
Cited In (4)
- Bayesian estimation of the phylogeography of African gorillas with genome-differentiated population trees
- Consistency and identifiability of the polymorphism-aware phylogenetic models
- An alternative derivation of the stationary distribution of the multivariate neutral Wright-Fisher model for low mutation rates with a view to mutation rate estimation from site frequency data
- Inference in population genetics using forward and backward, discrete and continuous time processes
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