RSEM
From MaRDI portal
Cited in
(only showing first 100 items - show all)- StringTie
- Robust Correlation Toolbox
- STAR
- MSIQ: joint modeling of multiple RNA-seq samples for accurate isoform quantification
- Bayesian estimation of differential transcript usage from RNA-seq data
- edgeR
- onechannelgui
- casper
- DEseq
- Model-based feature selection and clustering of RNA-seq data for unsupervised subtype discovery
- RNA bioinformatics
- PerMallows
- VARNA
- CompaRNA
- HTSeq
- Oases
- RNAmute
- RNAexinv
- RNAfbinv
- RNAalifold
- CentroidAlign
- RactIP
- COFOLD
- PicXAA-R
- CENTROIDFOLD
- IPknot
- DAFS
- PETfold
- PETcofold
- PPfold
- RNAG
- R-Coffee
- RNAspa
- RNASTAR
- jViz.Rna
- Assemble
- R-CHIE
- R4RNA
- RILogo
- R2R
- RNA2D3D
- RNAplex
- RSeQC
- SeqMap
- ASPIC
- PIntron
- Exogean
- REDItools
- NGS-Trex
- SortMeRNA
- ARB
- TagCleaner
- EMIRGE
- Minimus
- TopHat
- EBSeq
- RIPSeeker
- PARalyzer
- DARNED
- ExpEdit
- PatSearch
- WAR
- SCOOP
- AstexViewer
- ASPicDB
- PolyA_DB
- SPEPlip
- PredGPI
- ASTALAVISTA
- OptiRNAi
- OligoWalk
- Enrichr
- featureCounts
- A Markov random field-based approach for joint estimation of differentially expressed genes in mouse transcriptome data
- Fast approximation of small p-values in permutation tests by partitioning the permutations
- GENCODE
- DRIMSeq
- BayesMallows
- DiffCoEx
- VarScan
- SNVMix
- Salmon
- MapSplice
- Yanagi
- RapMap
- abSNP
- GlfMultiples
- Sniper
- WemIQ
- MITIE
- PERMORY
- Yanagi: transcript segment library construction for RNA-seq quantification
- abSNP: RNA-Seq SNP calling in repetitive regions via abundance estimation
- zinbwave
- Analysis of expression profile and gene variation via development of methods for next generation sequencing data
- A simulation framework for correlated count data of features subsets in high-throughput sequencing or proteomics experiments
- Bayesian Hierarchical Varying-Sparsity Regression Models with Application to Cancer Proteogenomics
- iClusterPlus
- SIHR
- NB.MClust
This page was built for software: RSEM
