gcrma

swMATH6104MaRDI QIDQ18240FDOQ18240

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Cited In (74)

• Review of statistical analyses in drug discovery and chemogenomics
• Biplot methodology in exploratory analysis of microarray data
• Statistical methods for the analysis of high-throughput data based on functional profiles derived from the Gene Ontology
• Estimation procedures for the false discovery rate: a systematic comparison for microarray data
• Accurate genome-scale percentage DNA methylation estimates from microarray data
• Validation in Genomics: CpG Island Methylation Revisited
• Identification of genomic markers correlated with sensitivity in solid tumors to Dasatinib using sparse principal components
• Time-course data prediction for repeatedly measured gene expression
• Empirical study for the agreement between statistical methods in quality assessment and control of microarray data
• Adaptive Filtering Increases Power to Detect Differentially Expressed Genes
• Assessing quality of hybridized RNA in Affymetrix GeneChip experiments using mixed-effects models
• A note on oligonucleotide expression values not being normally distributed
• On Gene Ranking Using Replicated Microarray Time Course Data
• Applied Statistical Genetics with R
• Test-statistic correlation and data-row correlation
• Partition clustering of high dimensional low sample size data based on \(p\)-values
• Two-Stage Procedures for High-Dimensional Data
• Bioinformatics and computational biology solutions using R and Bioconductor.
• Gene Expression Array Exploration Using $\mathcal{K}$ -Formal Concept Analysis
• Book review of: R. Gentleman et al., Bioinformatics and computational biology solutions using R and bioconductor
• Computational cell biology. Methods and protocols
• Latent variable modeling paradigms for genotype-trait association studies
• An empirical Bayesian approach for identifying differential coexpression in high-throughput experiments
• JavaStat: a Java/R-based statistical computing environment
• Data science vs. statistics: two cultures?
• Robust estimation of the parameters of \(g\)-\textit{and}-\(h\) distributions, with applications to outlier detection
• An empirical Bayes change-point model for transcriptome time-course data
• Frozen robust multiarray analysis (fRMA)
• Functional Regression Analysis of Fluorescence Curves
• Error Distribution for Gene Expression Data
• Removing technical variability in RNA-seq data using conditional quantile normalization
• A two-sample test for high-dimensional data with applications to gene-set testing
• A statistical framework for the analysis of microarray probe-level data
• Statistical inference based on robust low-rank data matrix approximation
• Interpoint distance tests for high-dimensional comparison studies
• An iterative algorithm for fitting nonconvex penalized generalized linear models with grouped predictors
• Projected tests for high-dimensional covariance matrices
• Shrinkage of dispersion parameters in the binomial family, with application to differential exon skipping
• Correlation tests for high-dimensional data using extended cross-data-matrix methodology
• Sample size reassessment for a two-stage design controlling the false discovery rate
• A Model-Based Background Adjustment for Oligonucleotide Expression Arrays
• Estimation of selected parameters
• Nested nonnegative cone analysis
• Deriving and comparing the distribution for the number of false positives in single step methods to control \(k\)-FWER
• Interactive Visualization of Hierarchically Structured Data
• A mixture factor model with applications to microarray data
• Context-Specific Nested Effects Models
• BGX: a fully Bayesian integrated approach to the analysis of Affymetrix GeneChip data
• An Enhanced Quantile Approach for Assessing Differential Gene Expressions
• Inference on high-dimensional mean vectors with fewer observations than the dimension
• The Gibbs-plaid biclustering model
• Hierarchical modeling and differential expression analysis for RNA-seq experiments with inbred and hybrid genotypes
• Multiple tests of association with biological annotation metadata
• Bayesian testing of many hypotheses \(\times \) many genes: a study of sleep apnea
• Bayesian factor models for the detection of coherent patterns in gene expression data
• PQN and DQN: algorithms for expression microarrays
• Evaluation of Laplace distribution-based ANOVA models applied to microarray data
• Gaga: a parsimonious and flexible model for differential expression analysis
• Projection Pursuit Based on Gaussian Mixtures and Evolutionary Algorithms
• Laplace approximated EM microarray analysis: an empirical Bayes approach for comparative microarray experiments
• Robust gene expression index
• Clustering non-linear interactions in factor analysis
• A systems biology approach to understanding alcoholic liver disease molecular mechanism: the development of static and dynamic models
• The potential and perils of preprocessing: building new foundations
• Empirical characterization of random forest variable importance measures
• Neyman's truncation test for two-sample means under high dimensional setting
• A look at multiplicity through misclassification
• Modified linear discriminant analysis approaches for classification of high-dimensional microarray data
• A statistical perspective on the challenges in molecular microbial biology
• MATHT: a web server for comprehensive transcriptome data analysis
• Title not available (Why is that?)
• Asymptotic normality for inference on multisample, high-dimensional mean vectors under mild conditions
• Comparing large covariance matrices under weak conditions on the dependence structure and its application to gene clustering
• An efficient and flexible multiplicity adjustment for chi-square endpoints

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