Cited in
(52)- Research on parallel finite element methods for the drift-diffusion model in semiconductor device simulations
- A super-Gaussian Poisson-Boltzmann model for electrostatic free energy calculation: smooth dielectric distribution for protein cavities and in both water and vacuum states
- Model reduction-based initialization methods for solving the Poisson-Nernst-Planck equations in three-dimensional ion channel simulations
- Automated parallel and body-fitted mesh generation in finite element simulation of macromolecular systems
- A local approximation of fundamental measure theory incorporated into three dimensional Poisson-Nernst-Planck equations to account for hard sphere repulsion among ions
- Efficient generation of membrane and solvent tetrahedral meshes for ion channel finite element calculation
- Progress in developing Poisson-Boltzmann equation solvers
- On preconditioning the treecode-accelerated boundary integral (TABI) Poisson-Boltzmann solver
- On developing stable finite element methods for pseudo-time simulation of biomolecular electrostatics
- Planewave density interpolation methods for 3D Helmholtz boundary integral equations
- Superconvergent gradient recovery for nonlinear Poisson-Nernst-Planck equations with applications to the ion channel problem
- Stabilized finite element methods to simulate the conductances of ion channels
- A treecode-accelerated boundary integral Poisson-Boltzmann solver for electrostatics of solvated biomolecules
- Parallel higher-order boundary integral electrostatics computation on molecular surfaces with curved triangulation
- A GPU-accelerated direct-sum boundary integral Poisson-Boltzmann solver
- TetGen
- APBS
- MIBPB
- UHBD
- AFMPB
- FFTSVD
- FEtk
- PHG
- PDB2PQR
- BIEPACK
- PAFMPB
- SDPBS
- TABI
- SG
- Medit
- MetaMol
- phgSurfaceCut
- SIMS
- Apbsmem
- ESES
- TransforMesh
- DelPhiPKa
- DevSim
- Sentaurus Device
- DAFMPB
- MolSurf
- nuSMPBIC
- An Effective Finite Element Iterative Solver for a Poisson--Nernst--Planck Ion Channel Model with Periodic Boundary Conditions
- tabipb
- VCMM
- Parallel AFMPB solver with automatic surface meshing for calculation of molecular solvation free energy
- Geometric and electrostatic modeling using molecular rigidity functions
- DASHMM Accelerated Adaptive Fast Multipole Poisson-Boltzmann Solver on Distributed Memory Architecture
- Finite element modeling of biomolecular systems in ionic solution
- Parallel adaptive finite element algorithms for solving the coupled electro-diffusion equations
- DelPhi
- PNPSIC
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