Genealogical-tree probabilities in the infinitely-many-site model

DOI10.1007/BF00276949zbMath0716.92012OpenAlexW2025545045WikidataQ52545547 ScholiaQ52545547MaRDI QIDQ753709

Robert C. Griffiths

Publication date: 1989

Published in: Journal of Mathematical Biology (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1007/bf00276949

zbMATH Keywords

population geneticsgenealogical treeinfinitely-many-site model

Mathematics Subject Classification ID

Trees (05C05) Applications of graph theory (05C90) Applications of branching processes (60J85) Branching processes (Galton-Watson, birth-and-death, etc.) (60J80) Genetics and epigenetics (92D10) Software, source code, etc. for problems pertaining to biology (92-04)

Related Items (13)

Importance sampling for Lambda-coalescents in the infinitely many sites model ⋮ Gene mapping via the ancestral recombination graph ⋮ Importance sampling on coalescent histories. I ⋮ Ancestral processes with selection ⋮ The asymptotic behavior of an urn model arising ⋮ The transition distribution of a sample from a Wright-Fisher diffusion with general small mutation rates ⋮ Inference from gene trees in a subdivided population ⋮ Ancestral inference from haplotypes and mutations ⋮ Unrooted genealogical tree probabilities in the infinitely-many-sites model ⋮ Probability of a segregating pattern in a sample of DNA sequences ⋮ Maximum likelihood estimation of population divergence times and population phylogenies under the infinite sites model ⋮ The ages of mutations in gene trees ⋮ Coalescing into the 21st century: An overview and prospects of coalescent theory

Cites Work

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• The birth process with immigration, and the genealogical structure of large populations
• Line-of-descent and genealogical processes, and their applications in population genetics models
• Pólya-like urns and the Ewens' sampling formula
• The infinitely-many-sites model as a measure-valued diffusion
• The sampling theory of neutral alleles and an urn model in population genetics
• The population genealogy of the infinitely-many neutral alleles model
• Counting genealogical trees
• Allelic frequencies given the sample's common ancestral type
• The coalescent
• On the number of segregating sites in genetical models without recombination
• The sampling theory of selectively neutral alleles
• The infinitely-many-neutral-alleles diffusion model by ages
• The ages of alleles and a coalescent

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