SPrenylC-PseAAC: a sequence-based model developed via Chou's 5-steps rule and general PseAAC for identifying S-prenylation sites in proteins

The preliminary efficacy evaluation of the CTLA-4-ig treatment against lupus nephritis through \textit{in-silico} analyses, Rational design, conformational analysis and membrane-penetrating dynamics study of Bac2A-derived antimicrobial peptides against gram-positive clinical strains isolated from pyemia, Dforml(KNN)-PseAAC: detecting formylation sites from protein sequences using K-nearest neighbor algorithm via Chou's 5-step rule and pseudo components

pSuc-Lys: predict lysine succinylation sites in proteins with PseAAC and ensemble random forest approach
Naïve Bayes classifier with feature selection to identify phage virion proteins
Prediction of protein structure classes by incorporating different protein descriptors into general Chou's pseudo amino acid composition
Predicting protein submitochondrial locations by incorporating the pseudo-position specific scoring matrix into the general Chou's pseudo-amino acid composition
Identifying 5-methylcytosine sites in RNA sequence using composite encoding feature into Chou's PseKNC
IMem-2LSAAC: a two-level model for discrimination of membrane proteins and their types by extending the notion of SAAC into Chou's pseudo amino acid composition
Some remarks on protein attribute prediction and pseudo amino acid composition
BlaPred: predicting and classifying \(\beta\)-lactamase using a 3-tier prediction system via Chou's general PseAAC
Predicting apoptosis protein subcellular localization by integrating auto-cross correlation and PSSM into Chou's PseAAC
pLoc\_bal-mGneg: predict subcellular localization of Gram-negative bacterial proteins by quasi-balancing training dataset and general PseAAC
Identify Gram-negative bacterial secreted protein types by incorporating different modes of PSSM into Chou's general PseAAC via Kullback-Leibler divergence
Predicting structural classes of proteins by incorporating their global and local physicochemical and conformational properties into general Chou's PseAAC
iMethyl-STTNC: identification of N\(^6\)-methyladenosine sites by extending the idea of SAAC into Chou's PseAAC to formulate RNA sequences
Predicting membrane protein types by incorporating a novel feature set into Chou's general PseAAC
Analysis and prediction of ion channel inhibitors by using feature selection and Chou's general pseudo amino acid composition
iPPI-PseAAC(CGR): identify protein-protein interactions by incorporating chaos game representation into PseAAC
Fu-SulfPred: identification of protein S-sulfenylation sites by fusing forests via Chou's general PseAAC
pSSbond-PseAAC: prediction of disulfide bonding sites by integration of PseAAC and statistical moments
Prediction of protein subcellular localization with oversampling approach and Chou's general PseAAC
\textbf{iLoc-Virus}: a multi-label learning classifier for identifying the subcellular localization of virus proteins with both single and multiple sites
Prediction of \(\beta\)-lactamase and its class by Chou's pseudo-amino acid composition and support vector machine
Gram-positive and Gram-negative protein subcellular localization by incorporating evolutionary-based descriptors into Chou's general PseAAC
Chou's pseudo amino acid composition improves sequence-based antifreeze protein prediction